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1EM2
Asym. Unit
Info
Asym.Unit (44 KB)
Biol.Unit 1 (39 KB)
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(1)
Title
:
STAR-RELATED LIPID TRANSPORT DOMAIN OF MLN64
Authors
:
Y. Tsujishita, J. H. Hurley
Date
:
14 Mar 00 (Deposition) - 02 May 00 (Release) - 11 Aug 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Beta Barrel, Lipid Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Tsujishita, J. H. Hurley
Structure And Lipid Transport Mechanism Of A Star-Related Domain.
Nat. Struct. Biol. V. 7 408 2000
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
2a: D(-)-TARTARIC ACID (TARa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MSE
3
Mod. Amino Acid
SELENOMETHIONINE
2
TAR
1
Ligand/Ion
D(-)-TARTARIC ACID
[
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
VAL A:341 , VAL A:342 , SER A:343 , ARG A:345 , SER A:395 , ASN A:396 , LEU A:414 , HOH A:632 , HOH A:636 , HOH A:651
BINDING SITE FOR RESIDUE TAR A 500
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: START (A:248-443)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
START
PS50848
START domain profile.
STAR3_HUMAN
248-443
1
A:248-443
[
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Exons
(8, 8)
Info
All Exons
Exon 1.7b (A:230-234)
Exon 1.8a (A:235-265)
Exon 1.8c (A:266-286)
Exon 1.8d (A:287-318)
Exon 1.9 (A:319-345)
Exon 1.10 (A:345-380)
Exon 1.11a (A:380-411)
Exon 1.11e (A:412-443)
View:
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All Exon Boundaries
1: Boundary 1.6g/1.7b
2: Boundary 1.7b/1.8a
3: Boundary 1.8a/1.8c
4: Boundary 1.8c/1.8d
5: Boundary 1.8d/1.9
6: Boundary 1.9/1.10
7: Boundary 1.10/1.11a
8: Boundary 1.11a/1.11e
9: Boundary 1.11e/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000336308
1a
ENSE00001057947
chr17:
37793318-37793484
167
STAR3_HUMAN
-
0
0
-
-
1.3a
ENST00000336308
3a
ENSE00002173531
chr17:
37809734-37810003
270
STAR3_HUMAN
1-73
73
0
-
-
1.4b
ENST00000336308
4b
ENSE00001057951
chr17:
37813261-37813338
78
STAR3_HUMAN
74-99
26
0
-
-
1.5b
ENST00000336308
5b
ENSE00001057946
chr17:
37814028-37814105
78
STAR3_HUMAN
100-125
26
0
-
-
1.6b
ENST00000336308
6b
ENSE00001057941
chr17:
37814226-37814279
54
STAR3_HUMAN
126-143
18
0
-
-
1.6d
ENST00000336308
6d
ENSE00001057943
chr17:
37814658-37814775
118
STAR3_HUMAN
144-183
40
0
-
-
1.6g
ENST00000336308
6g
ENSE00001057948
chr17:
37814975-37815073
99
STAR3_HUMAN
183-216
34
0
-
-
1.7b
ENST00000336308
7b
ENSE00001057950
chr17:
37815304-37815359
56
STAR3_HUMAN
216-234
19
1
A:230-234
5
1.8a
ENST00000336308
8a
ENSE00001057944
chr17:
37815714-37815806
93
STAR3_HUMAN
235-265
31
1
A:235-265
31
1.8c
ENST00000336308
8c
ENSE00000950629
chr17:
37816464-37816526
63
STAR3_HUMAN
266-286
21
1
A:266-286
21
1.8d
ENST00000336308
8d
ENSE00000950630
chr17:
37816684-37816779
96
STAR3_HUMAN
287-318
32
1
A:287-318
32
1.9
ENST00000336308
9
ENSE00000950631
chr17:
37817063-37817142
80
STAR3_HUMAN
319-345
27
1
A:319-345
27
1.10
ENST00000336308
10
ENSE00000950632
chr17:
37817234-37817338
105
STAR3_HUMAN
345-380
36
1
A:345-380
36
1.11a
ENST00000336308
11a
ENSE00001239164
chr17:
37818504-37818597
94
STAR3_HUMAN
380-411
32
1
A:380-411
32
1.11e
ENST00000336308
11e
ENSE00001844235
chr17:
37819057-37819737
681
STAR3_HUMAN
412-445
34
1
A:412-443
32
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1em2a_ (A:)
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
TBP-like
(289)
Superfamily
:
Bet v1-like
(158)
Family
:
STAR domain
(6)
Protein domain
:
Lipid transport domain of Mln64
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1em2a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1em2A00 (A:230-443)
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Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4
(47)
Homologous Superfamily
:
[code=3.30.530.20, no name defined]
(47)
Human (Homo sapiens)
(6)
1a
1em2A00
A:230-443
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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Asym.Unit (44 KB)
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