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Asym. Unit
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Asym.Unit (611 KB)
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Models
(30 )
Title
:
SOLUTION STRUCTURE OF THE HUMAN CC CHEMOKINE, I-309
Authors
:
D. W. Keizer, M. P. Crump, T. W. Lee, C. M. Slupsky, I. Clark-Lewis, B. D. Sykes
Date
:
11 Mar 00 (Deposition) - 01 Sep 00 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (30 x)
Keywords
:
Chemokine Fold, Immune System
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. W. Keizer, M. P. Crump, T. W. Lee, C. M. Slupsky, I. Clark-Lewis, B. D. Sykes
Human Cc Chemokine I-309, Structural Consequences Of The Additional Disulfide Bond.
Biochemistry V. 39 6053 2000
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
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1: SMALL_CYTOKINES_CC (A:11-52)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SMALL_CYTOKINES_CC
PS00472
Small cytokines (intercrine/chemokine) C-C subfamily signature.
CCL1_HUMAN
33-74
1
A:11-52
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Exons
(3, 3)
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All Exons
Exon 1.1 (A:1-4)
Exon 1.2 (A:4-41)
Exon 1.3 (A:41-74)
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1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000225842
1
ENSE00000887560
chr17:
32690230-32690105
126
CCL1_HUMAN
1-26
26
1
A:1-4
4
1.2
ENST00000225842
2
ENSE00000713736
chr17:
32688915-32688804
112
CCL1_HUMAN
26-63
38
1
A:4-41
38
1.3
ENST00000225842
3
ENSE00001017469
chr17:
32687680-32687399
282
CCL1_HUMAN
63-96
34
1
A:41-74
34
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SCOP Domains
(1, 1)
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1a: SCOP_d1el0a_ (A:)
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
IL8-like
(118)
Superfamily
:
Interleukin 8-like chemokines
(117)
Family
:
Interleukin 8-like chemokines
(113)
Protein domain
:
CC chemokine I-309
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1el0a_
A:
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CATH Domains
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1a: CATH_1el0A00 (A:1-74)
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Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
OB fold (Dihydrolipoamide Acetyltransferase, E2P)
(1040)
Homologous Superfamily
:
[code=2.40.50.40, no name defined]
(161)
[unclassified]
(41)
1a
1el0A00
A:1-74
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Chain A
Asymmetric Unit 1
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