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1EG5
Asym. Unit
Info
Asym.Unit (128 KB)
Biol.Unit 1 (122 KB)
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(1)
Title
:
NIFS-LIKE PROTEIN
Authors
:
J. T. Kaiser, T. Clausen, G. P. Bourenkow, H. -D. Bartunik, S. Steinbach R. Huber
Date
:
13 Feb 00 (Deposition) - 02 Apr 00 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Plp-Dependent Enzymes, Iron-Sulfur-Cluster Synthesis, C-S Beta Lyase, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. T. Kaiser, T. Clausen, G. P. Bourenkow, H. D. Bartunik, S. Steinbacher, R. Huber
Crystal Structure Of A Nifs-Like Protein From Thermotoga Maritima: Implications For Iron Sulphur Cluster Assembly.
J. Mol. Biol. V. 297 451 2000
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Hetero Components
(3, 26)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
1o: SELENOMETHIONINE (MSEo)
1p: SELENOMETHIONINE (MSEp)
1q: SELENOMETHIONINE (MSEq)
1r: SELENOMETHIONINE (MSEr)
1s: SELENOMETHIONINE (MSEs)
1t: SELENOMETHIONINE (MSEt)
1u: SELENOMETHIONINE (MSEu)
1v: SELENOMETHIONINE (MSEv)
2a: PYRIDOXAL-5'-PHOSPHATE (PLPa)
2b: PYRIDOXAL-5'-PHOSPHATE (PLPb)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
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Label:
No.
Name
Count
Type
Full Name
1
MSE
22
Mod. Amino Acid
SELENOMETHIONINE
2
PLP
2
Ligand/Ion
PYRIDOXAL-5'-PHOSPHATE
3
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN B:8 , ALA B:9 , HIS B:99 , ASN B:150 , ARG B:350
BINDING SITE FOR RESIDUE SO4 B 602
2
AC2
SOFTWARE
ASN A:8 , ALA A:9 , HIS A:99 , ASN A:150 , ARG A:350
BINDING SITE FOR RESIDUE SO4 A 603
3
AC3
SOFTWARE
THR A:238 , CYS B:69 , ALA B:70 , THR B:71 , HIS B:99 , MSE B:146 , ASN B:150 , ASP B:177 , VAL B:179 , GLN B:180 , SER B:200 , HIS B:202 , LYS B:203
BINDING SITE FOR RESIDUE PLP B 600
4
AC4
SOFTWARE
CYS A:69 , ALA A:70 , THR A:71 , HIS A:99 , ASN A:150 , ASP A:177 , VAL A:179 , GLN A:180 , SER A:200 , HIS A:202 , LYS A:203 , THR B:238
BINDING SITE FOR RESIDUE PLP A 601
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1eg5a_ (A:)
1b: SCOP_d1eg5b_ (B:)
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(
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(
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(
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
PLP-dependent transferase-like
(627)
Superfamily
:
PLP-dependent transferases
(625)
Family
:
Cystathionine synthase-like
(64)
Protein domain
:
NifS-like protein/selenocysteine lyase
(7)
Thermotoga maritima [TaxId: 2336]
(2)
1a
d1eg5a_
A:
1b
d1eg5b_
B:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1eg5A02 (A:14-257)
1b: CATH_1eg5B02 (B:14-257)
2a: CATH_1eg5B01 (B:2-13,B:258-365)
2b: CATH_1eg5A01 (A:2-13,A:258-365)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Aspartate Aminotransferase; domain 2
(384)
Homologous Superfamily
:
Type I PLP-dependent aspartate aminotransferase-like (Major domain)
(384)
Thermotoga maritima. Organism_taxid: 2336. Strain: orf 1692.
(1)
1a
1eg5A02
A:14-257
1b
1eg5B02
B:14-257
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Aspartate Aminotransferase, domain 1
(355)
Homologous Superfamily
:
Aspartate Aminotransferase, domain 1
(354)
Thermotoga maritima. Organism_taxid: 2336. Strain: orf 1692.
(1)
2a
1eg5B01
B:2-13,B:258-365
2b
1eg5A01
A:2-13,A:258-365
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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