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1E8I
Asym. Unit
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Asym.Unit (45 KB)
Biol.Unit 1 (41 KB)
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(1)
Title
:
HUMAN CD69 - TETRAGONAL FORM
Authors
:
J. Tormo
Date
:
21 Sep 00 (Deposition) - 26 Sep 00 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Hematopoietic Cell Receptor, Leucocyte, C-Type Lectin-Like, Nkd, Klr
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. S. Llera, F. Viedma, F. Sanchez-Madrid, J. Tormo
Crystal Structure Of The C-Type Lectin-Like Domain From The Human Hematopoietic Cell Receptor Cd69
J. Biol. Chem. V. 276 7312 2001
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
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Label:
No.
Name
Count
Type
Full Name
1
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:134 , GLY B:137 , ARG B:138 , HOH B:2028 , HOH B:2029
BINDING SITE FOR RESIDUE SO4 B1200
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: C_TYPE_LECTIN_2 (A:92-195,B:92-195)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
C_TYPE_LECTIN_2
PS50041
C-type lectin domain profile.
CD69_HUMAN
92-195
2
A:92-195
B:92-195
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Exons
(3, 6)
Info
All Exons
Exon 1.3a (A:83-129 | B:83-129)
Exon 1.4 (A:130-164 | B:130-164)
Exon 1.5 (A:164-199 | B:164-199)
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1: Boundary 1.2/1.3a
2: Boundary 1.3a/1.4
3: Boundary 1.4/1.5
4: Boundary 1.5/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000228434
1
ENSE00000821823
chr12:
9913497-9913353
145
CD69_HUMAN
1-22
22
0
-
-
1.2
ENST00000228434
2
ENSE00000718673
chr12:
9909015-9908893
123
CD69_HUMAN
22-63
42
0
-
-
1.3a
ENST00000228434
3a
ENSE00000718665
chr12:
9907857-9907658
200
CD69_HUMAN
63-129
67
2
A:83-129
B:83-129
47
47
1.4
ENST00000228434
4
ENSE00000718659
chr12:
9907286-9907183
104
CD69_HUMAN
130-164
35
2
A:130-164
B:130-164
35
35
1.5
ENST00000228434
5
ENSE00000821822
chr12:
9906185-9905082
1104
CD69_HUMAN
164-199
36
2
A:164-199
B:164-199
36
36
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1e8ia_ (A:)
1b: SCOP_d1e8ib_ (B:)
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)
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
C-type lectin-like
(322)
Superfamily
:
C-type lectin-like
(322)
Family
:
C-type lectin domain
(182)
Protein domain
:
CD69
(3)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d1e8ia_
A:
1b
d1e8ib_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1e8iA00 (A:83-199)
1b: CATH_1e8iB00 (B:83-199)
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)
Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
Mannose-Binding Protein A; Chain A
(180)
Homologous Superfamily
:
Mannose-Binding Protein A, subunit A
(180)
Human (Homo sapiens)
(80)
1a
1e8iA00
A:83-199
1b
1e8iB00
B:83-199
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Pfam Domains
(0, 0)
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all PFAM domains
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Asymmetric Unit 1
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