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1E6W
Asym. Unit
Info
Asym.Unit (171 KB)
Biol.Unit 1 (163 KB)
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(1)
Title
:
RAT BRAIN 3-HYDROXYACYL-COA DEHYDROGENASE BINARY COMPLEX WITH NADH AND ESTRADIOL
Authors
:
J. A. Read, A. J. Powell, R. L. Brady
Date
:
23 Aug 00 (Deposition) - 25 May 01 (Release) - 12 Jul 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Dehydrogenase, Beta-Oxidation Of Fatty Acids, Steroids, Amyloid Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. J. Powell, J. A. Read, M. J. Banfield, F. Gunn-Moore, S. D. Yan, J. Lustbader, A. R. Stern, D. M. Stern, R. L. Brady
Recognition Of Structurally Diverse Substrates By Type Ii 3-Hydroxyacyl-Coa Dehydrogenase (Hadh Ii) Amyloid-Beta Binding Alcohol Dehydrogenase (Abad)
J. Mol. Biol. V. 303 311 2000
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Hetero Components
(2, 5)
Info
All Hetero Components
1a: ESTRADIOL (ESTa)
2a: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADa)
2b: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADb)
2c: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADc)
2d: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
EST
1
Ligand/Ion
ESTRADIOL
2
NAD
4
Ligand/Ion
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:17 , SER A:20 , GLY A:21 , LEU A:22 , ASP A:41 , ALA A:63 , ASN A:64 , VAL A:65 , CYS A:91 , ALA A:92 , GLY A:93 , VAL A:120 , THR A:153 , ALA A:154 , TYR A:168 , LYS A:172 , PRO A:198 , GLY A:199 , LEU A:200 , PHE A:201 , THR A:203 , PRO A:204 , LEU A:205 , LEU A:206 , HOH A:459 , HOH A:485 , HOH A:477 , HOH A:423 , HOH A:428 , HOH A:441 , HOH A:501
BINDING SITE FOR RESIDUE NAD A 301
2
AC2
SOFTWARE
GLY B:17 , SER B:20 , GLY B:21 , LEU B:22 , ASP B:41 , VAL B:42 , ALA B:63 , ASN B:64 , VAL B:65 , CYS B:91 , ALA B:92 , GLY B:93 , VAL B:120 , THR B:153 , ALA B:154 , TYR B:168 , LYS B:172 , PRO B:198 , GLY B:199 , LEU B:200 , PHE B:201 , THR B:203 , PRO B:204 , LEU B:205 , LEU B:206 , HOH B:466 , HOH B:484 , HOH B:436 , HOH B:446
BINDING SITE FOR RESIDUE NAD B 301
3
AC3
SOFTWARE
GLY C:17 , SER C:20 , GLY C:21 , LEU C:22 , ASP C:41 , VAL C:42 , ALA C:63 , ASN C:64 , VAL C:65 , CYS C:91 , ALA C:92 , GLY C:93 , VAL C:120 , THR C:153 , ALA C:154 , TYR C:168 , LYS C:172 , PRO C:198 , GLY C:199 , LEU C:200 , PHE C:201 , THR C:203 , PRO C:204 , LEU C:205 , HOH C:432 , HOH C:476 , HOH C:474 , HOH C:481 , HOH C:459 , HOH C:473 , EST C:302
BINDING SITE FOR RESIDUE NAD C 301
4
AC4
SOFTWARE
GLY D:17 , SER D:20 , GLY D:21 , LEU D:22 , ASP D:41 , VAL D:42 , ALA D:63 , ASN D:64 , VAL D:65 , CYS D:91 , ALA D:92 , GLY D:93 , VAL D:120 , THR D:153 , ALA D:154 , TYR D:168 , LYS D:172 , PRO D:198 , GLY D:199 , LEU D:200 , PHE D:201 , THR D:203 , PRO D:204 , LEU D:205 , HOH D:476 , HOH D:449 , HOH D:432 , HOH D:469 , HOH D:428 , HOH D:414 , HOH D:450
BINDING SITE FOR RESIDUE NAD D 301
5
AC5
SOFTWARE
ALA C:95 , GLN C:165 , TYR C:168 , LEU C:206 , NAD C:301 , HOH C:464 , HOH C:462 , HOH C:504 , HOH C:533
BINDING SITE FOR RESIDUE EST L 350
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: ADH_SHORT (A:155-183,B:155-183,C:155-183,D:15...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ADH_SHORT
PS00061
Short-chain dehydrogenases/reductases family signature.
HCD2_RAT
155-183
4
A:155-183
B:155-183
C:155-183
D:155-183
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1e6wa_ (A:)
1b: SCOP_d1e6wb_ (B:)
1c: SCOP_d1e6wc_ (C:)
1d: SCOP_d1e6wd_ (D:)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Tyrosine-dependent oxidoreductases
(503)
Protein domain
:
Type II 3-hydroxyacyl-CoA dehydrogenase
(6)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(3)
1a
d1e6wa_
A:
1b
d1e6wb_
B:
1c
d1e6wc_
C:
1d
d1e6wd_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1e6wB00 (B:7-261)
1b: CATH_1e6wC00 (C:7-261)
1c: CATH_1e6wA00 (A:7-261)
1d: CATH_1e6wD00 (D:7-261)
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Organisms
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
NAD(P)-binding Rossmann-like Domain
(1244)
Norway rat (Rattus norvegicus)
(18)
1a
1e6wB00
B:7-261
1b
1e6wC00
C:7-261
1c
1e6wA00
A:7-261
1d
1e6wD00
D:7-261
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (171 KB)
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Header - Biol.Unit 1
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