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1E0C
Asym. Unit
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Asym.Unit (55 KB)
Biol.Unit 1 (51 KB)
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(1)
Title
:
SULFURTRANSFERASE FROM AZOTOBACTER VINELANDII
Authors
:
D. Bordo, D. Deriu, R. Colnaghi, A. Carpen, S. Pagani, M. Bolognesi
Date
:
23 Mar 00 (Deposition) - 08 May 00 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Sulfurtransferase, Sulfur Metabolism, Thiosulfate:Cyanide Sulfurtransferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Bordo, D. Deriu, R. Colnaghi, A. Carpen, S. Pagani, M. Bolognesi
The Crystal Structure Of A Sulfurtransferase From Azotobacter Vinelandii Highlights The Evolutionary Relationship Between The Rhodanese And Phosphatase Enzyme Families
J. Mol. Biol. V. 298 691 2000
(for further references see the
PDB file header
)
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Hetero Components
(4, 8)
Info
All Hetero Components
1a: S-MERCAPTOCYSTEINE (CSSa)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CSS
1
Mod. Amino Acid
S-MERCAPTOCYSTEINE
2
EDO
2
Ligand/Ion
1,2-ETHANEDIOL
3
MG
3
Ligand/Ion
MAGNESIUM ION
4
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:144 , ASP A:145 , GLU A:146 , HOH A:2334 , HOH A:2335
BINDING SITE FOR RESIDUE SO4 A 372
2
AC2
SOFTWARE
ARG A:151 , HOH A:2336 , HOH A:2337
BINDING SITE FOR RESIDUE SO4 A 373
3
AC3
SOFTWARE
HOH A:2052 , HOH A:2053 , HOH A:2117 , HOH A:2118 , HOH A:2119 , HOH A:2121
BINDING SITE FOR RESIDUE MG A 376
4
AC4
SOFTWARE
HOH A:2103 , HOH A:2122 , HOH A:2226 , HOH A:2228 , HOH A:2253 , HOH A:2254
BINDING SITE FOR RESIDUE MG A 377
5
AC5
SOFTWARE
HOH A:2019 , HOH A:2020 , HOH A:2058 , HOH A:2067 , HOH A:2149 , HOH A:2158
BINDING SITE FOR RESIDUE MG A 378
6
AC6
SOFTWARE
LEU A:158 , GLY A:159 , ALA A:160 , LEU A:163 , ILE A:165 , PRO A:188 , GLY A:189 , HOH A:2338
BINDING SITE FOR RESIDUE EDO A 374
7
AC7
SOFTWARE
PHE A:46 , ARG A:51 , GLU A:75 , HOH A:2339 , HOH A:2341
BINDING SITE FOR RESIDUE EDO A 375
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(3, 4)
Info
All PROSITE Patterns/Profiles
1: RHODANESE_3 (A:21-129|A:159-270)
2: RHODANESE_1 (A:36-47)
3: RHODANESE_2 (A:251-261)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RHODANESE_3
PS50206
Rhodanese domain profile.
THTR_AZOVI
21-129
159-270
2
A:21-129
A:159-270
2
RHODANESE_1
PS00380
Rhodanese signature 1.
THTR_AZOVI
36-47
1
A:36-47
3
RHODANESE_2
PS00683
Rhodanese C-terminal signature.
THTR_AZOVI
251-261
1
A:251-261
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Exons
(0, 0)
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All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1e0ca1 (A:1-135)
1b: SCOP_d1e0ca2 (A:136-271)
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(
)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Rhodanese/Cell cycle control phosphatase
(39)
Superfamily
:
Rhodanese/Cell cycle control phosphatase
(39)
Family
:
Multidomain sulfurtransferase (rhodanese)
(14)
Protein domain
:
Sulfurtransferase
(4)
Azotobacter vinelandii [TaxId: 354]
(3)
1a
d1e0ca1
A:1-135
1b
d1e0ca2
A:136-271
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1e0cA01 (A:1-144)
1b: CATH_1e0cA02 (A:145-271)
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(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Oxidized Rhodanese; domain 1
(42)
Homologous Superfamily
:
Oxidized Rhodanese, domain 1
(42)
Azotobacter vinelandii. Organism_taxid: 354.
(3)
1a
1e0cA01
A:1-144
1b
1e0cA02
A:145-271
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Pfam Domains
(0, 0)
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all PFAM domains
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Chain A
Asymmetric Unit 1
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