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1DZQ
Asym. Unit
Info
Asym.Unit (154 KB)
Biol.Unit 1 (148 KB)
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(1)
Title
:
LECTIN UEA-II COMPLEXED WITH GALACTOSE
Authors
:
R. Loris, H. De Greve, M. -H. Dao-Thi, J. Messens, A. Imberty, L. Wyns
Date
:
07 Mar 00 (Deposition) - 22 Jun 00 (Release) - 31 Aug 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.85
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Carbohydrate Binding, Sugar Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Loris, H. De Greve, M. -H. Dao-Thi, J. Messens, A. Imberty, L. Wyns
Structural Basis Of Carbohydrate Recognition By Lectin Ii From Ulex Europaeus, A Protein With A Promiscuous Carbohydrate Binding Site
J. Mol. Biol. V. 301 987 2000
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Hetero Components
(4, 14)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
2a: BETA-D-GALACTOSE (GALa)
2b: BETA-D-GALACTOSE (GALb)
3a: MANGANESE (II) ION (MNa)
3b: MANGANESE (II) ION (MNb)
3c: MANGANESE (II) ION (MNc)
3d: MANGANESE (II) ION (MNd)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
4c: N-ACETYL-D-GLUCOSAMINE (NAGc)
4d: N-ACETYL-D-GLUCOSAMINE (NAGd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CA
4
Ligand/Ion
CALCIUM ION
2
GAL
2
Ligand/Ion
BETA-D-GALACTOSE
3
MN
4
Ligand/Ion
MANGANESE (II) ION
4
NAG
4
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:101 , SER A:112 , LYS B:203
BINDING SITE FOR RESIDUE NAG A 401
02
AC2
SOFTWARE
VAL A:85 , ASP A:86 , GLY A:106 , TYR A:130 , GLY A:219 , ASN A:220 , GLU A:223
BINDING SITE FOR RESIDUE GAL A 502
03
AC3
SOFTWARE
SER B:101 , SER B:112 , SER B:114 , PRO B:137
BINDING SITE FOR RESIDUE NAG B 401
04
AC4
SOFTWARE
SER C:101 , SER C:112
BINDING SITE FOR RESIDUE NAG C 401
05
AC5
SOFTWARE
VAL C:85 , ASP C:86 , TYR C:135 , GLY C:219 , ASN C:220 , GLU C:223
BINDING SITE FOR RESIDUE GAL C 502
06
AC6
SOFTWARE
SER D:101 , SER D:112
BINDING SITE FOR RESIDUE NAG D 401
07
AC7
SOFTWARE
GLU A:126 , ASP A:128 , ASP A:139 , HIS A:144
BINDING SITE FOR RESIDUE MN A 301
08
AC8
SOFTWARE
ASP A:128 , TYR A:130 , ASN A:136 , ASP A:139
BINDING SITE FOR RESIDUE CA A 302
09
AC9
SOFTWARE
GLU B:126 , ASP B:128 , ASP B:139 , HIS B:144
BINDING SITE FOR RESIDUE MN B 301
10
BC1
SOFTWARE
ASP B:128 , TYR B:130 , ASN B:136 , ASP B:139
BINDING SITE FOR RESIDUE CA B 302
11
BC2
SOFTWARE
GLU C:126 , ASP C:128 , ASP C:139 , HIS C:144
BINDING SITE FOR RESIDUE MN C 301
12
BC3
SOFTWARE
ASP C:128 , TYR C:130 , ASN C:136 , ASP C:139
BINDING SITE FOR RESIDUE CA C 302
13
BC4
SOFTWARE
GLU D:126 , ASP D:128 , ASP D:139 , HIS D:144
BINDING SITE FOR RESIDUE MN D 301
14
BC5
SOFTWARE
ASP D:128 , TYR D:130 , ASN D:136 , ASP D:139
BINDING SITE FOR RESIDUE CA D 302
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1dzqa_ (A:)
1b: SCOP_d1dzqc_ (C:)
1c: SCOP_d1dzqd_ (D:)
1d: SCOP_d1dzqb_ (B:)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
Legume lectins
(238)
Protein domain
:
Legume lectin
(110)
Furze (Ulex europaeus), UEA-II [TaxId: 3902]
(5)
1a
d1dzqa_
A:
1b
d1dzqc_
C:
1c
d1dzqd_
D:
1d
d1dzqb_
B:
[
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1dzqA00 (A:3-239)
1b: CATH_1dzqB00 (B:3-239)
1c: CATH_1dzqC00 (C:3-239)
1d: CATH_1dzqD00 (D:3-239)
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)
Organisms
(
)
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)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.200, no name defined]
(421)
Furze (Ulex europaeus)
(7)
1a
1dzqA00
A:3-239
1b
1dzqB00
B:3-239
1c
1dzqC00
C:3-239
1d
1dzqD00
D:3-239
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Pfam Domains
(0, 0)
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all PFAM domains
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Asymmetric Unit 1
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Asym.Unit (154 KB)
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