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1DM7
Asym. Unit
Info
Asym.Unit (154 KB)
Biol.Unit 1 (147 KB)
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(1)
Title
:
BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH HOMOARGININE (H4B FREE)
Authors
:
C. S. Raman, H. Li, P. Martasek, G. J. Southan, B. S. S. Masters, T. L. Poul
Date
:
13 Dec 99 (Deposition) - 13 Dec 00 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Alpha-Beta Fold, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. S. Raman, H. Li, P. Martasek, G. J. Southan, B. S. S. Masters, T. L. Poulos
Crystal Structures Of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed With Various Inhibitors
To Be Published
(for further references see the
PDB file header
)
[
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Hetero Components
(6, 14)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: CACODYLATE ION (CACa)
2b: CACODYLATE ION (CACb)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
3d: GLYCEROL (GOLd)
3e: GLYCEROL (GOLe)
4a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
4b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
5a: L-HOMOARGININE (HRGa)
5b: L-HOMOARGININE (HRGb)
6a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
CAC
2
Ligand/Ion
CACODYLATE ION
3
GOL
5
Ligand/Ion
GLYCEROL
4
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
5
HRG
2
Ligand/Ion
L-HOMOARGININE
6
ZN
1
Ligand/Ion
ZINC ION
[
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:188 , TRP A:358 , VAL A:420 , SER A:428 , HOH A:3054 , HOH A:3087 , HOH A:3099
BINDING SITE FOR RESIDUE ACT A 1860
02
AC2
SOFTWARE
TRP A:324 , CYS A:384 , LYS A:438 , ARG A:440 , GLY A:441 , HOH A:3021
BINDING SITE FOR RESIDUE CAC A 950
03
AC3
SOFTWARE
TRP B:358 , VAL B:420 , SER B:428 , HOH B:2901 , HOH B:2932
BINDING SITE FOR RESIDUE ACT B 2860
04
AC4
SOFTWARE
TYR B:83 , TRP B:324 , CYS B:384
BINDING SITE FOR RESIDUE CAC B 950
05
AC5
SOFTWARE
CYS A:96 , CYS A:101 , CYS B:96 , CYS B:101
BINDING SITE FOR RESIDUE ZN B 2900
06
AC6
SOFTWARE
TRP A:180 , ARG A:185 , CYS A:186 , SER A:228 , PHE A:355 , SER A:356 , TRP A:358 , GLU A:363 , TRP A:449 , TYR A:477 , HRG A:1740 , GOL A:1890 , HOH A:2927 , HOH A:2933 , HOH A:2995 , HOH A:3020 , HOH A:3098
BINDING SITE FOR RESIDUE HEM A 1500
07
AC7
SOFTWARE
TRP B:180 , ARG B:185 , CYS B:186 , VAL B:187 , SER B:228 , MET B:341 , PHE B:355 , SER B:356 , TRP B:358 , GLU B:363 , TRP B:449 , TYR B:477 , HRG B:2740 , GOL B:2890 , HOH B:2921 , HOH B:2923 , HOH B:3055
BINDING SITE FOR RESIDUE HEM B 2500
08
AC8
SOFTWARE
GLN A:249 , TRP A:358 , TYR A:359 , GLU A:363 , ASN A:368 , HEM A:1500 , HOH A:2986 , HOH A:3023
BINDING SITE FOR RESIDUE HRG A 1740
09
AC9
SOFTWARE
GLN B:249 , TYR B:333 , VAL B:338 , TRP B:358 , TYR B:359 , GLU B:363 , ASN B:368 , HEM B:2500 , HOH B:2909 , HOH B:3070
BINDING SITE FOR RESIDUE HRG B 2740
10
BC1
SOFTWARE
VAL A:263 , ARG A:264 , GLY A:265 , ARG A:287 , ARG A:374 , TYR A:375
BINDING SITE FOR RESIDUE GOL A 1885
11
BC2
SOFTWARE
ARG A:367 , ALA A:448 , TRP A:449 , HEM A:1500 , HOH A:2924 , HOH A:2947 , TRP B:447 , PHE B:462
BINDING SITE FOR RESIDUE GOL A 1890
12
BC3
SOFTWARE
PHE A:462 , GLU A:465 , HOH A:2903 , SER B:104 , GOL B:2890
BINDING SITE FOR RESIDUE GOL A 2880
13
BC4
SOFTWARE
VAL B:263 , ARG B:264 , GLY B:265 , PRO B:267 , ARG B:287 , TYR B:375
BINDING SITE FOR RESIDUE GOL B 2885
14
BC5
SOFTWARE
GOL A:2880 , ARG B:367 , ALA B:448 , TRP B:449 , HEM B:2500
BINDING SITE FOR RESIDUE GOL B 2890
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: NOS (A:185-192,B:185-192)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NOS
PS60001
Nitric oxide synthase (NOS) signature.
NOS3_BOVIN
185-192
2
A:185-192
B:185-192
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1dm7a_ (A:)
1b: SCOP_d1dm7b_ (B:)
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Classes
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(
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Superfamily
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Family
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Protein domain
:
Nitric oxide (NO) synthase oxygenase domain
(298)
Cow (Bos taurus) [TaxId: 9913]
(85)
1a
d1dm7a_
A:
1b
d1dm7b_
B:
[
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_1dm7A03 (A:314-336,A:359-424)
1b: CATH_1dm7B03 (B:314-336,B:359-424)
2a: CATH_1dm7A01 (A:84-201,A:228-238,A:342-356,A:426-450)
2b: CATH_1dm7B01 (B:84-201,B:228-238,B:342-356,B:426-450)
3a: CATH_1dm7A02 (A:202-227,A:242-313,A:477-481)
3b: CATH_1dm7B02 (B:202-227,B:242-313,B:477-481)
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Homologous Superfamilies
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(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Bovine Endothelial Nitric Oxide Synthase Heme Domain; Chain: A,domain 3
(105)
Homologous Superfamily
:
Nitric Oxide Synthase; Chain A, domain 3
(105)
Cattle (Bos taurus)
(38)
1a
1dm7A03
A:314-336,A:359-424
1b
1dm7B03
B:314-336,B:359-424
Topology
:
Nitric Oxide Synthase; Chain A, domain 1
(105)
Homologous Superfamily
:
Nitric Oxide Synthase; Chain A, domain 1
(105)
Cattle (Bos taurus)
(38)
2a
1dm7A01
A:84-201,A:228-238,A:342-356,A:426-450
2b
1dm7B01
B:84-201,B:228-238,B:342-356,B:426-450
Topology
:
Nitric Oxide Synthase;Heme Domain; Chain A, domain 2
(105)
Homologous Superfamily
:
Nitric Oxide Synthase;Heme Domain;Chain A domain 2
(105)
Cattle (Bos taurus)
(38)
3a
1dm7A02
A:202-227,A:242-313,A:477-481
3b
1dm7B02
B:202-227,B:242-313,B:477-481
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Asymmetric Unit 1
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