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1DK5
Biol. Unit 3
Info
Asym.Unit (121 KB)
Biol.Unit 1 (58 KB)
Biol.Unit 2 (58 KB)
Biol.Unit 3 (113 KB)
Biol.Unit 4 (113 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ANNEXIN 24(CA32) FROM CAPSICUM ANNUUM
Authors
:
A. Hofmann, J. Proust, A. Dorowski, R. Schantz, R. Huber
Date
:
06 Dec 99 (Deposition) - 06 Dec 00 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Biol. Unit 4: A,B (1x)
Keywords
:
Plant Annexin, Capsicum Annuum, Bell Pepper, Calcium Binding Protein, Metal Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Hofmann, J. Proust, A. Dorowski, R. Schantz, R. Huber
Annexin 24 From Capsicum Annuum. X-Ray Structure And Biochemical Characterization.
J. Biol. Chem. V. 275 8072 2000
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(1, 19)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1aa: SULFATE ION (SO4aa)
1ab: SULFATE ION (SO4ab)
1ac: SULFATE ION (SO4ac)
1ad: SULFATE ION (SO4ad)
1ae: SULFATE ION (SO4ae)
1af: SULFATE ION (SO4af)
1ag: SULFATE ION (SO4ag)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
1d: SULFATE ION (SO4d)
1e: SULFATE ION (SO4e)
1f: SULFATE ION (SO4f)
1g: SULFATE ION (SO4g)
1h: SULFATE ION (SO4h)
1i: SULFATE ION (SO4i)
1j: SULFATE ION (SO4j)
1k: SULFATE ION (SO4k)
1l: SULFATE ION (SO4l)
1m: SULFATE ION (SO4m)
1n: SULFATE ION (SO4n)
1o: SULFATE ION (SO4o)
1p: SULFATE ION (SO4p)
1q: SULFATE ION (SO4q)
1r: SULFATE ION (SO4r)
1s: SULFATE ION (SO4s)
1t: SULFATE ION (SO4t)
1u: SULFATE ION (SO4u)
1v: SULFATE ION (SO4v)
1w: SULFATE ION (SO4w)
1x: SULFATE ION (SO4x)
1y: SULFATE ION (SO4y)
1z: SULFATE ION (SO4z)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
SO4
19
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(32, 32)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:83 , GLU A:102 , ASP A:268 , SO4 A:809
BINDING SITE FOR RESIDUE SO4 A 801
02
AC2
SOFTWARE
HIS A:98 , ARG A:136 , TYR A:137 , ARG B:506 , TRP B:507
BINDING SITE FOR RESIDUE SO4 A 802
03
AC3
SOFTWARE
ARG A:106 , TRP A:107 , HOH A:1168 , ARG B:536 , TYR B:537
BINDING SITE FOR RESIDUE SO4 A 803
04
AC4
SOFTWARE
LYS A:109 , ASN A:111 , HIS A:148 , THR A:149 , THR A:150 , HIS A:153
BINDING SITE FOR RESIDUE SO4 A 804
05
AC5
SOFTWARE
HIS A:17 , HIS A:153 , ASP A:232 , GLU A:233 , PHE A:234 , HOH A:1170 , ARG B:475
BINDING SITE FOR RESIDUE SO4 A 805
06
AC6
SOFTWARE
TYR A:247 , PRO A:248 , GLU A:249 , HIS A:250
BINDING SITE FOR RESIDUE SO4 A 806
07
AC7
SOFTWARE
TYR B:547
BINDING SITE FOR RESIDUE SO4 A 807
08
AC8
SOFTWARE
ARG A:130 , SER A:140 , LEU A:141 , GLU A:142 , TYR B:564
BINDING SITE FOR RESIDUE SO4 A 808
09
AC9
SOFTWARE
GLU A:102 , THR A:108 , ASP A:268 , HIS A:269 , ARG A:272 , SO4 A:801 , THR B:478
BINDING SITE FOR RESIDUE SO4 A 809
10
BC1
SOFTWARE
ARG A:306 , GLY A:307 , HOH A:866 , HOH A:882 , ARG B:663
BINDING SITE FOR RESIDUE SO4 A 810
11
BC2
SOFTWARE
LEU A:225 , GLU A:229 , ARG A:239 , LYS A:243
BINDING SITE FOR RESIDUE SO4 A 811
12
BC3
SOFTWARE
GLU A:76 , HOH A:1100
BINDING SITE FOR RESIDUE SO4 A 812
13
BC4
SOFTWARE
SER A:122 , PRO A:123 , LYS A:124
BINDING SITE FOR RESIDUE SO4 A 813
14
BC5
SOFTWARE
HIS A:6 , HIS A:7 , ALA A:10 , LYS A:283 , PHE B:465
BINDING SITE FOR RESIDUE SO4 A 814
15
BC6
SOFTWARE
LYS B:509 , ASN B:511 , HIS B:548 , THR B:549 , THR B:550 , HIS B:553 , HOH B:1162
BINDING SITE FOR RESIDUE SO4 B 815
16
BC7
SOFTWARE
TYR B:647 , PRO B:648 , GLU B:649 , HIS B:650
BINDING SITE FOR RESIDUE SO4 B 817
17
BC8
SOFTWARE
GLU B:654 , ASP B:658 , SO4 B:832
BINDING SITE FOR RESIDUE SO4 B 818
18
BC9
SOFTWARE
GLU A:170 , ASP A:172 , GLN A:208 , LYS B:539
BINDING SITE FOR RESIDUE SO4 B 819
19
CC1
SOFTWARE
ASN B:610 , ASN B:614
BINDING SITE FOR RESIDUE SO4 B 820
20
CC2
SOFTWARE
TYR B:537 , ARG B:574 , SO4 B:825 , HOH B:1010
BINDING SITE FOR RESIDUE SO4 B 821
21
CC3
SOFTWARE
SO4 B:832 , HOH B:924
BINDING SITE FOR RESIDUE SO4 B 822
22
CC4
SOFTWARE
GLY B:466 , GLU B:467 , ASP B:468 , HOH B:1023
BINDING SITE FOR RESIDUE SO4 B 823
23
CC5
SOFTWARE
ARG A:106 , LEU B:490 , GLU B:494
BINDING SITE FOR RESIDUE SO4 B 824
24
CC6
SOFTWARE
LYS B:501 , SO4 B:821
BINDING SITE FOR RESIDUE SO4 B 825
25
CC7
SOFTWARE
GLU A:143 , ALA A:146 , TYR A:147 , GLU B:579 , ARG B:599 , THR B:603 , ARG B:604
BINDING SITE FOR RESIDUE SO4 B 826
26
CC8
SOFTWARE
VAL B:487 , HIS B:498 , GLU B:502
BINDING SITE FOR RESIDUE SO4 B 827
27
CC9
SOFTWARE
THR A:78 , HOH A:1081 , SER B:510 , PHE B:512 , HIS B:669 , HOH B:936
BINDING SITE FOR RESIDUE SO4 B 828
28
DC1
SOFTWARE
LYS B:505 , ARG B:506
BINDING SITE FOR RESIDUE SO4 B 829
29
DC2
SOFTWARE
HIS B:408 , MET B:409 , ALA B:410
BINDING SITE FOR RESIDUE SO4 B 830
30
DC3
SOFTWARE
GLU A:131 , LYS B:524
BINDING SITE FOR RESIDUE SO4 B 831
31
DC4
SOFTWARE
ARG B:639 , SO4 B:818 , SO4 B:822
BINDING SITE FOR RESIDUE SO4 B 832
32
DC5
SOFTWARE
GLU B:476 , HIS B:479
BINDING SITE FOR RESIDUE SO4 B 833
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1dk5a_ (A:)
1b: SCOP_d1dk5b_ (B:)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Annexin
(61)
Superfamily
:
Annexin
(61)
Family
:
Annexin
(56)
Protein domain
:
Plant annexin-like protein
(3)
Bell pepper (Capsicum annuum) [TaxId: 4072]
(1)
1a
d1dk5a_
A:
1b
d1dk5b_
B:
[
close SCOP info
]
CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1dk5A03 (A:248-320)
1b: CATH_1dk5B03 (B:648-720)
1c: CATH_1dk5A02 (A:91-162)
1d: CATH_1dk5B02 (B:491-562)
1e: CATH_1dk5A04 (A:174-243)
1f: CATH_1dk5B04 (B:574-643)
1g: CATH_1dk5B01 (B:408-490)
1h: CATH_1dk5A01 (A:5-90)
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Architectures
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(
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Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Annexin V; domain 1
(80)
Homologous Superfamily
:
[code=1.10.220.10, no name defined]
(58)
Capsicum annuum. Organism_taxid: 4072.
(1)
1a
1dk5A03
A:248-320
1b
1dk5B03
B:648-720
1c
1dk5A02
A:91-162
1d
1dk5B02
B:491-562
1e
1dk5A04
A:174-243
1f
1dk5B04
B:574-643
1g
1dk5B01
B:408-490
1h
1dk5A01
A:5-90
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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