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1DFC
Asym. Unit
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Asym.Unit (158 KB)
Biol.Unit 1 (79 KB)
Biol.Unit 2 (79 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN FASCIN, AN ACTIN-CROSSLINKING PROTEIN
Authors
:
A. A. Fedorov, E. V. Fedorov, S. Ono, F. Matsumura, S. C. Almo, S. K. Burle York Sgx Research Center For Structural Genomics (Nysgxrc)
Date
:
18 Nov 99 (Deposition) - 22 Nov 00 (Release) - 28 Jul 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Beta-Trefoil Fold For All Four Domains, Structural Genomics, Psi, Protein Structure Initiative, New York Sgx Research Center For Structural Genomics, Nysgxrc, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
R. S. Sedeh, A. A. Fedorov, E. V. Fedorov, S. Ono, F. Matsumura, S. C. Almo, M. Bathe
Structure, Evolutionary Conservation, And Conformational Dynamics Of Homo Sapiens Fascin-1, An F-Actin Crosslinking Protein.
J. Mol. Biol. V. 400 589 2010
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(5, 10)
Info
All Exons
Exon 1.1 (A:1008-1275 (gaps) | B:2008-2275 (...)
Exon 1.4b (A:1279-1330 | B:2280-2330)
Exon 1.5 (A:1330-1371 | B:2330-2371)
Exon 1.6d (A:1371-1427 | B:2371-2427)
Exon 1.8b (A:1427-1493 | B:2427-2493)
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.4b
3: Boundary 1.4b/1.5
4: Boundary 1.5/1.6d
5: Boundary 1.6d/1.8b
6: Boundary 1.8b/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000382361
1
ENSE00001491843
chr7:
5632454-5633399
946
FSCN1_HUMAN
1-278
278
2
A:1008-1275 (gaps)
B:2008-2275 (gaps)
268
268
1.4b
ENST00000382361
4b
ENSE00001771357
chr7:
5642888-5643044
157
FSCN1_HUMAN
278-330
53
2
A:1279-1330
B:2280-2330
52
51
1.5
ENST00000382361
5
ENSE00000669698
chr7:
5643127-5643248
122
FSCN1_HUMAN
330-371
42
2
A:1330-1371
B:2330-2371
42
42
1.6d
ENST00000382361
6d
ENSE00001385806
chr7:
5643494-5643661
168
FSCN1_HUMAN
371-427
57
2
A:1371-1427
B:2371-2427
57
57
1.8b
ENST00000382361
8b
ENSE00001812070
chr7:
5644903-5646286
1384
FSCN1_HUMAN
427-493
67
2
A:1427-1493
B:2427-2493
67
67
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SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d1dfca1 (A:1008-1140)
1b: SCOP_d1dfca2 (A:1141-1259)
1c: SCOP_d1dfca3 (A:1260-1382)
1d: SCOP_d1dfca4 (A:1383-1493)
1e: SCOP_d1dfcb1 (B:2008-2140)
1f: SCOP_d1dfcb2 (B:2141-2259)
1g: SCOP_d1dfcb3 (B:2260-2382)
1h: SCOP_d1dfcb4 (B:2383-2493)
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Class
:
All beta proteins
(24004)
Fold
:
beta-Trefoil
(385)
Superfamily
:
Actin-crosslinking proteins
(8)
Family
:
Fascin
(6)
Protein domain
:
Fascin
(6)
Human (Homo sapiens) [TaxId: 9606]
(6)
1a
d1dfca1
A:1008-1140
1b
d1dfca2
A:1141-1259
1c
d1dfca3
A:1260-1382
1d
d1dfca4
A:1383-1493
1e
d1dfcb1
B:2008-2140
1f
d1dfcb2
B:2141-2259
1g
d1dfcb3
B:2260-2382
1h
d1dfcb4
B:2383-2493
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1dfcA02 (A:1139-1261)
1b: CATH_1dfcB02 (B:2139-2261)
1c: CATH_1dfcA03 (A:1008-1138)
1d: CATH_1dfcB03 (B:2008-2138)
1e: CATH_1dfcA01 (A:1262-1386)
1f: CATH_1dfcB01 (B:2262-2386)
1g: CATH_1dfcA04 (A:1387-1493)
1h: CATH_1dfcB04 (B:2387-2491)
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Class
:
Mainly Beta
(13760)
Architecture
:
Trefoil
(289)
Topology
:
Trefoil (Acidic Fibroblast Growth Factor, subunit A)
(289)
Homologous Superfamily
:
[code=2.80.10.50, no name defined]
(289)
Human (Homo sapiens)
(131)
1a
1dfcA02
A:1139-1261
1b
1dfcB02
B:2139-2261
1c
1dfcA03
A:1008-1138
1d
1dfcB03
B:2008-2138
1e
1dfcA01
A:1262-1386
1f
1dfcB01
B:2262-2386
1g
1dfcA04
A:1387-1493
1h
1dfcB04
B:2387-2491
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Asym.Unit (158 KB)
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