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1DDG
Asym. Unit
Info
Asym.Unit (284 KB)
Biol.Unit 1 (141 KB)
Biol.Unit 2 (141 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SIR-FP60
Authors
:
A. Gruez, D. Pignol, M. Zeghouf, J. Coves, M. Fontecave, J. L. Ferrer, J. C. Fontecilla-Camps
Date
:
10 Nov 99 (Deposition) - 13 Nov 00 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.01
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Cytochrome P450 Reductase, Fnr, Flavoprotein, Modular Protein, Oxidoreductase
(Keyword Search:
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)
Reference
:
A. Gruez, D. Pignol, M. Zeghouf, J. Coves, M. Fontecave, J. L. Ferrer, J. C. Fontecilla-Camps
Four Crystal Structures Of The 60 Kda Flavoprotein Monomer Of The Sulfite Reductase Indicate A Disordered Flavodoxin-Like Module.
J. Mol. Biol. V. 299 199 2000
(for further references see the
PDB file header
)
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
1b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
2a: SULFATE ION (SO4a)
View:
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No.
Name
Count
Type
Full Name
1
FAD
2
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
2
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR B:325 , ASN B:327 , ARG B:381 , HOH B:712 , HOH B:748
BINDING SITE FOR RESIDUE SO4 B 602
2
AC2
SOFTWARE
ARG A:250 , THR A:322 , VAL A:323 , ALA A:356 , ARG A:386 , LEU A:387 , TYR A:388 , SER A:389 , THR A:404 , GLY A:406 , TYR A:410 , GLY A:419 , GLY A:420 , ALA A:421 , SER A:422 , TYR A:599 , HOH A:602 , HOH A:603 , HOH A:610 , HOH A:615 , HOH A:625 , HOH A:711 , HOH A:712 , HOH A:733 , HOH A:818
BINDING SITE FOR RESIDUE FAD A 600
3
AC3
SOFTWARE
THR B:322 , VAL B:323 , ALA B:356 , ARG B:386 , LEU B:387 , TYR B:388 , SER B:389 , THR B:404 , GLY B:406 , VAL B:408 , TYR B:410 , GLY B:419 , GLY B:420 , ALA B:421 , SER B:422 , THR B:462 , TYR B:599 , HOH B:604 , HOH B:608 , HOH B:613 , HOH B:621 , HOH B:622 , HOH B:673 , HOH B:709 , HOH B:718 , HOH B:728 , HOH B:755 , HOH B:819
BINDING SITE FOR RESIDUE FAD B 601
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: FAD_FR (A:234-448,B:234-448)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FAD_FR
PS51384
Ferredoxin reductase-type FAD binding domain profile.
CYSJ_ECOLI
234-448
2
A:234-448
B:234-448
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1ddga1 (A:226-446)
1b: SCOP_d1ddgb1 (B:226-446)
2a: SCOP_d1ddga2 (A:447-599)
2b: SCOP_d1ddgb2 (B:447-599)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Reductase/isomerase/elongation factor common domain
(381)
Superfamily
:
Riboflavin synthase domain-like
(130)
Family
:
NADPH-cytochrome p450 reductase FAD-binding domain-like
(16)
Protein domain
:
Sulfite reductase flavoprotein
(2)
Escherichia coli [TaxId: 562]
(2)
1a
d1ddga1
A:226-446
1b
d1ddgb1
B:226-446
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ferredoxin reductase-like, C-terminal NADP-linked domain
(120)
Superfamily
:
Ferredoxin reductase-like, C-terminal NADP-linked domain
(120)
Family
:
NADPH-cytochrome p450 reductase-like
(8)
Protein domain
:
Sulfite reductase flavoprotein
(2)
Escherichia coli [TaxId: 562]
(2)
2a
d1ddga2
A:447-599
2b
d1ddgb2
B:447-599
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_1ddgA03 (A:445-599)
1b: CATH_1ddgB03 (B:445-599)
2a: CATH_1ddgA02 (A:280-384)
2b: CATH_1ddgB02 (B:280-384)
3a: CATH_1ddgA01 (A:226-279,A:385-444)
3b: CATH_1ddgB01 (B:226-279,B:385-444)
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Organisms
(
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module
(85)
Escherichia coli. Organism_taxid: 562.
(2)
1a
1ddgA03
A:445-599
1b
1ddgB03
B:445-599
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
NADPH-cytochrome p450 Reductase; Chain A, domain 3
(8)
Homologous Superfamily
:
NADPH-cytochrome p450 Reductase; Chain A, domain 3
(8)
Escherichia coli. Organism_taxid: 562.
(2)
2a
1ddgA02
A:280-384
2b
1ddgB02
B:280-384
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Elongation Factor Tu (Ef-tu); domain 3
(323)
Homologous Superfamily
:
Translation factors
(223)
Escherichia coli. Organism_taxid: 562.
(3)
3a
1ddgA01
A:226-279,A:385-444
3b
1ddgB01
B:226-279,B:385-444
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (284 KB)
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