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1DBH
Asym. Unit
Info
Asym.Unit (63 KB)
Biol.Unit 1 (58 KB)
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(1)
Title
:
DBL AND PLECKSTRIN HOMOLOGY DOMAINS FROM HSOS1
Authors
:
S. M. Soisson, J. Kuriyan
Date
:
17 Dec 98 (Deposition) - 23 Dec 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Guanine Nucleotide Exchange Factor, Gene Regulation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. M. Soisson, A. S. Nimnual, M. Uy, D. Bar-Sagi, J. Kuriyan
Crystal Structure Of The Dbl And Pleckstrin Homology Domains From The Human Son Of Sevenless Protein.
Cell(Cambridge, Mass. ) V. 95 259 1998
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(1, 8)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MSE
8
Mod. Amino Acid
SELENOMETHIONINE
[
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]
Sites
(0, 0)
Info
All Sites
View:
Select:
Label:
Sorry, no Info available
[
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]
SAPs(SNPs)/Variants
(24, 24)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_066035 (I252T, chain A, )
02: VAR_030424 (T266K, chain A, )
03: VAR_030425 (M269R, chain A, )
04: VAR_064504 (M269T, chain A, )
05: VAR_030426 (D309Y, chain A, )
06: VAR_030427 (Y337C, chain A, )
07: VAR_066036 (T378A, chain A, )
08: VAR_066037 (M422V, chain A, )
09: VAR_066038 (E424K, chain A, )
10: VAR_030428 (W432R, chain A, )
11: VAR_030429 (E433K, chain A, )
12: VAR_066041 (G434K, chain A, )
13: VAR_030430 (G434R, chain A, )
14: VAR_066042 (I437T, chain A, )
15: VAR_030431 (C441Y, chain A, )
16: VAR_064505 (Q477R, chain A, )
17: VAR_066043 (P478L, chain A, )
18: VAR_066044 (P478R, chain A, )
19: VAR_066045 (G482R, chain A, )
20: VAR_066046 (L490R, chain A, )
21: VAR_064506 (R497Q, chain A, )
22: VAR_030432 (S548R, chain A, )
23: VAR_066047 (T549K, chain A, )
24: VAR_030433 (L550P, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_066035
I
252
T
SOS1_HUMAN
Disease (NS4)
142094234
A
I
252
T
02
UniProt
VAR_030424
T
266
K
SOS1_HUMAN
Disease (NS4)
137852812
A
T
266
K
03
UniProt
VAR_030425
M
269
R
SOS1_HUMAN
Disease (NS4)
137852813
A
M
269
R
04
UniProt
VAR_064504
M
269
T
SOS1_HUMAN
Disease (NS4)
---
A
M
269
T
05
UniProt
VAR_030426
D
309
Y
SOS1_HUMAN
Disease (NS4)
---
A
D
309
Y
06
UniProt
VAR_030427
Y
337
C
SOS1_HUMAN
Disease (NS4)
---
A
Y
337
C
07
UniProt
VAR_066036
T
378
A
SOS1_HUMAN
Unclassified
---
A
T
378
A
08
UniProt
VAR_066037
M
422
V
SOS1_HUMAN
Disease (NS4)
---
A
M
422
V
09
UniProt
VAR_066038
E
424
K
SOS1_HUMAN
Disease (NS4)
---
A
E
424
K
10
UniProt
VAR_030428
W
432
R
SOS1_HUMAN
Disease (NS4)
---
A
W
432
R
11
UniProt
VAR_030429
E
433
K
SOS1_HUMAN
Disease (NS4)
---
A
E
433
K
12
UniProt
VAR_066041
G
434
K
SOS1_HUMAN
Disease (NS4)
---
A
G
434
K
13
UniProt
VAR_030430
G
434
R
SOS1_HUMAN
Disease (NS4)
---
A
G
434
R
14
UniProt
VAR_066042
I
437
T
SOS1_HUMAN
Disease (NS4)
---
A
I
437
T
15
UniProt
VAR_030431
C
441
Y
SOS1_HUMAN
Disease (NS4)
---
A
C
441
Y
16
UniProt
VAR_064505
Q
477
R
SOS1_HUMAN
Disease (NS4)
---
A
Q
477
R
17
UniProt
VAR_066043
P
478
L
SOS1_HUMAN
Unclassified
---
A
P
478
L
18
UniProt
VAR_066044
P
478
R
SOS1_HUMAN
Disease (NS4)
---
A
P
478
R
19
UniProt
VAR_066045
G
482
R
SOS1_HUMAN
Disease (NS4)
---
A
G
482
R
20
UniProt
VAR_066046
L
490
R
SOS1_HUMAN
Disease (NS4)
---
A
L
490
R
21
UniProt
VAR_064506
R
497
Q
SOS1_HUMAN
Disease (NS4)
---
A
R
497
Q
22
UniProt
VAR_030432
S
548
R
SOS1_HUMAN
Disease (NS4)
---
A
S
548
R
23
UniProt
VAR_066047
T
549
K
SOS1_HUMAN
Disease (NS4)
---
A
T
549
K
24
UniProt
VAR_030433
L
550
P
SOS1_HUMAN
Disease (NS4)
---
A
L
550
P
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: DH_2 (A:200-390)
2: PH_DOMAIN (A:443-546)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DH_2
PS50010
Dbl homology (DH) domain profile.
SOS1_HUMAN
200-390
1
A:200-390
2
PH_DOMAIN
PS50003
PH domain profile.
SOS1_HUMAN
443-546
1
A:443-546
[
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]
Exons
(0, 0)
Info
All Exons
View:
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1dbha1 (A:198-404)
2a: SCOP_d1dbha2 (A:418-550)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
DBL homology domain (DH-domain)
(22)
Superfamily
:
DBL homology domain (DH-domain)
(22)
Family
:
DBL homology domain (DH-domain)
(19)
Protein domain
:
Son of sevenless-1 (sos-1)
(3)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d1dbha1
A:198-404
Class
:
All beta proteins
(24004)
Fold
:
PH domain-like barrel
(258)
Superfamily
:
PH domain-like
(257)
Family
:
Pleckstrin-homology domain (PH domain)
(102)
Protein domain
:
Son of sevenless-1 (sos-1)
(5)
Human (Homo sapiens) [TaxId: 9606]
(4)
2a
d1dbha2
A:418-550
[
close SCOP info
]
CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1dbhA01 (A:198-421)
2a: CATH_1dbhA02 (A:423-550)
View:
Select:
Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Dbl Homology Domain; Chain A
(13)
Homologous Superfamily
:
Dbl Homology Domain; Chain A
(13)
Human (Homo sapiens)
(6)
1a
1dbhA01
A:198-421
Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
PH-domain like
(150)
Homologous Superfamily
:
Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)
(147)
Human (Homo sapiens)
(85)
2a
1dbhA02
A:423-550
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
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]
Atom Selection
(currently selected atoms:
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)
Protein
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Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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