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1D9G
Asym. Unit
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Asym.Unit (44 KB)
Biol.Unit 1 (40 KB)
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(1)
Title
:
BOVINE INTERFERON-GAMMA AT 2.9 ANGSTROMS
Authors
:
M. Randal, A. A. Kossiakoff
Date
:
27 Oct 99 (Deposition) - 10 Nov 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Helical Homodimer, Immune System
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Randal, A. A. Kossiakoff
The 2. 0 A Structure Of Bovine Interferon-Gamma; Assessment Of The Structural Differences Between Species.
Acta Crystallogr. , Sect. D V. 56 14 2000
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(4, 8)
Info
All Exons
Exon 1.1 (A:1-15 | B:3-15)
Exon 1.2 (A:16-38 | B:16-38 (gaps))
Exon 1.3 (A:39-99 | B:39-99)
Exon 1.4 (A:100-121 | B:100-121)
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1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/1.4
5: Boundary 1.4/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000016634
1
ENSBTAE00000135340
chr5:
49351209-49351415
207
IFNG_BOVIN
1-38
38
2
A:1-15
B:3-15
15
13
1.2
ENSBTAT00000016634
2
ENSBTAE00000135344
chr5:
49352566-49352634
69
IFNG_BOVIN
39-61
23
2
A:16-38
B:16-38 (gaps)
23
23
1.3
ENSBTAT00000016634
3
ENSBTAE00000135346
chr5:
49352730-49352912
183
IFNG_BOVIN
62-122
61
2
A:39-99
B:39-99
61
61
1.4
ENSBTAT00000016634
4
ENSBTAE00000135348
chr5:
49355305-49356033
729
IFNG_BOVIN
123-166
44
2
A:100-121
B:100-121
22
22
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SCOP Domains
(1, 2)
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All SCOP Domains
1a: SCOP_d1d9ga_ (A:)
1b: SCOP_d1d9gb_ (B:)
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Protein Domains
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Organisms
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)
Class
:
All alpha proteins
(14657)
Fold
:
4-helical cytokines
(168)
Superfamily
:
4-helical cytokines
(168)
Family
:
Interferons/interleukin-10 (IL-10)
(41)
Protein domain
:
Interferon-gamma
(8)
Cow (Bos taurus) [TaxId: 9913]
(3)
1a
d1d9ga_
A:
1b
d1d9gb_
B:
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CATH Domains
(1, 2)
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all CATH domains
1a: CATH_1d9gA00 (A:1-121)
1b: CATH_1d9gB00 (B:3-121)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Growth Hormone; Chain: A;
(136)
Homologous Superfamily
:
[code=1.20.1250.10, no name defined]
(130)
Cattle (Bos taurus)
(4)
1a
1d9gA00
A:1-121
1b
1d9gB00
B:3-121
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (44 KB)
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