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1D2B
Asym. Unit
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Asym.Unit (961 KB)
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Models
(29 )
Title
:
THE MMP-INHIBITORY, N-TERMINAL DOMAIN OF HUMAN TISSUE INHIBITOR OF METALLOPROTEINASES-1 (N-TIMP-1), SOLUTION NMR, 29 STRUCTURES
Authors
:
B. Wu, S. Arumugam, V. Semenchenko, K. Brew, S. R. Van Doren
Date
:
22 Sep 99 (Deposition) - 22 Dec 99 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (29 x)
Keywords
:
Ob-Fold, Beta Barrel, Protease Inhibitor, Mmp Inhibitor, Hydrolase Inhibitor
(Keyword Search:
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Reference
:
B. Wu, S. Arumugam, G. Gao, G. I. Lee, V. Semenchenko, W. Huang, K. Brew, S. R. Van Doren
Nmr Structure Of Tissue Inhibitor Of Metalloproteinases-1 Implicates Localized Induced Fit In Recognition Of Matrix Metalloproteinases.
J. Mol. Biol. V. 295 257 2000
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: NTR (A:1-124)
2: TIMP (A:1-13)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NTR
PS50189
NTR domain profile.
TIMP1_HUMAN
24-147
1
A:1-124
2
TIMP
PS00288
Tissue inhibitors of metalloproteinases signature.
TIMP1_HUMAN
24-36
1
A:1-13
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Exons
(4, 4)
Info
All Exons
Exon 1.3 (A:1-18)
Exon 1.4a (A:18-44)
Exon 1.4d (A:45-87)
Exon 1.4g (A:87-126)
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1: Boundary 1.1a/1.3
2: Boundary 1.3/1.4a
3: Boundary 1.4a/1.4d
4: Boundary 1.4d/1.4g
5: Boundary 1.4g/1.5b
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000218388
1a
ENSE00001472535
X:47441712-47441873
162
TIMP1_HUMAN
-
0
0
-
-
1.3
ENST00000218388
3
ENSE00002188016
X:47442807-47442935
129
TIMP1_HUMAN
1-41
41
1
A:1-18
18
1.4a
ENST00000218388
4a
ENSE00001687541
X:47444335-47444414
80
TIMP1_HUMAN
41-67
27
1
A:18-44
27
1.4d
ENST00000218388
4d
ENSE00002194942
X:47444604-47444730
127
TIMP1_HUMAN
68-110
43
1
A:45-87
43
1.4g
ENST00000218388
4g
ENSE00001622276
X:47444942-47445066
125
TIMP1_HUMAN
110-151
42
1
A:87-126
40
1.5b
ENST00000218388
5b
ENSE00001472498
X:47445920-47446188
269
TIMP1_HUMAN
152-207
56
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1d2ba_ (A:)
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Folds
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(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
OB-fold
(1179)
Superfamily
:
TIMP-like
(22)
Family
:
Tissue inhibitor of metalloproteinases, TIMP
(13)
Protein domain
:
TIMP-1
(6)
Human (Homo sapiens) [TaxId: 9606]
(6)
1a
d1d2ba_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1d2bA00 (A:1-126)
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Organisms
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Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
OB fold (Dihydrolipoamide Acetyltransferase, E2P)
(1040)
Homologous Superfamily
:
[code=2.40.50.120, no name defined]
(16)
Human (Homo sapiens)
(12)
1a
1d2bA00
A:1-126
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Pfam Domains
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