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1D0J
Biol. Unit 3
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Asym.Unit (169 KB)
Biol.Unit 1 (83 KB)
Biol.Unit 2 (85 KB)
Biol.Unit 3 (165 KB)
Biol.Unit 4 (165 KB)
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(1)
Title
:
STRUCTURE OF TNF RECEPTOR ASSOCIATED FACTOR 2 IN COMPLEX WITH A M4-1BB PEPTIDE
Authors
:
H. Ye, Y. C. Park, M. Kreishman, E. Kieff, H. Wu
Date
:
10 Sep 99 (Deposition) - 08 Mar 00 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K
Biol. Unit 1: A,B,C,G,H (1x)
Biol. Unit 2: D,E,F,I,J,K (1x)
Biol. Unit 3: A,B,C,D,E,F,G,H,I,J,K (1x)
Biol. Unit 4: A,B,C,D,E,F,G,H,I,J,K (1x)
Keywords
:
B-Sandwich, Protein-Peptide Complex, Apoptosis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Ye, Y. C. Park, M. Kreishman, E. Kieff, H. Wu
The Structural Basis For The Recognition Of Diverse Receptor Sequences By Traf2.
Mol. Cell V. 4 321 1999
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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All Hetero Components
1a: ACETYL GROUP (ACEa)
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PHE D:447
BINDING SITE FOR RESIDUE ACE I 230
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 6)
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1: MATH (A:351-496,B:351-496,C:351-496,D:35...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MATH
PS50144
MATH/TRAF domain profile.
TRAF2_HUMAN
351-496
6
A:351-496
B:351-496
C:351-496
D:351-496
E:351-496
F:351-496
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Exons
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SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d1d0ja1 (A:350-501)
1b: SCOP_d1d0jb1 (B:350-501)
1c: SCOP_d1d0jc1 (C:350-501)
1d: SCOP_d1d0jd1 (D:350-501)
1e: SCOP_d1d0je1 (E:350-501)
1f: SCOP_d1d0jf1 (F:350-501)
2a: SCOP_d1d0ja2 (A:334-349)
2b: SCOP_d1d0jb2 (B:334-349)
2c: SCOP_d1d0jc2 (C:334-349)
2d: SCOP_d1d0jd2 (D:334-349)
2e: SCOP_d1d0je2 (E:334-349)
2f: SCOP_d1d0jf2 (F:334-349)
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Class
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All beta proteins
(24004)
Fold
:
TRAF domain-like
(34)
Superfamily
:
TRAF domain-like
(34)
Family
:
MATH domain
(26)
Protein domain
:
TNF receptor associated factor 2 (TRAF2)
(10)
Human (Homo sapiens) [TaxId: 9606]
(10)
1a
d1d0ja1
A:350-501
1b
d1d0jb1
B:350-501
1c
d1d0jc1
C:350-501
1d
d1d0jd1
D:350-501
1e
d1d0je1
E:350-501
1f
d1d0jf1
F:350-501
Class
:
Coiled coil proteins
(689)
Fold
:
Parallel coiled-coil
(407)
Superfamily
:
Trimerization domain of TRAF
(15)
Family
:
Trimerization domain of TRAF
(15)
Protein domain
:
TRAF2
(10)
Human (Homo sapiens) [TaxId: 9606]
(10)
2a
d1d0ja2
A:334-349
2b
d1d0jb2
B:334-349
2c
d1d0jc2
C:334-349
2d
d1d0jd2
D:334-349
2e
d1d0je2
E:334-349
2f
d1d0jf2
F:334-349
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CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_1d0jA00 (A:334-501)
1b: CATH_1d0jB00 (B:334-501)
1c: CATH_1d0jC00 (C:334-501)
1d: CATH_1d0jD00 (D:334-501)
1e: CATH_1d0jE00 (E:334-501)
1f: CATH_1d0jF00 (F:334-501)
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Organisms
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Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A
(23)
Homologous Superfamily
:
Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A
(23)
Human (Homo sapiens)
(21)
1a
1d0jA00
A:334-501
1b
1d0jB00
B:334-501
1c
1d0jC00
C:334-501
1d
1d0jD00
D:334-501
1e
1d0jE00
E:334-501
1f
1d0jF00
F:334-501
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Pfam Domains
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Show PDB file:
Asym.Unit (169 KB)
Header - Asym.Unit
Biol.Unit 1 (83 KB)
Header - Biol.Unit 1
Biol.Unit 2 (85 KB)
Header - Biol.Unit 2
Biol.Unit 3 (165 KB)
Header - Biol.Unit 3
Biol.Unit 4 (165 KB)
Header - Biol.Unit 4
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