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1D0A
Biol. Unit 4
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Asym.Unit (180 KB)
Biol.Unit 1 (90 KB)
Biol.Unit 2 (89 KB)
Biol.Unit 3 (175 KB)
Biol.Unit 4 (176 KB)
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(1)
Title
:
STRUCTURE OF TNF RECEPTOR ASSOCIATED FACTOR 2 (TRAF2) IN COMPLEX WITH A HUMAN OX40 PEPTIDE
Authors
:
H. Ye, Y. C. Park, M. Kreishman, E. Kieff, H. Wu
Date
:
09 Sep 99 (Deposition) - 08 Mar 00 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,G,H,I (1x)
Biol. Unit 2: D,E,F,J,K,L (1x)
Biol. Unit 3: A,B,C,D,E,F,G,H,I,J,K,L (1x)
Biol. Unit 4: A,B,C,D,E,F,G,H,I,J,K,L (1x)
Keywords
:
B-Sandwich, Protein-Peptide Complex, Apoptosis
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
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Reference
:
H. Ye, Y. C. Park, M. Kreishman, E. Kieff, H. Wu
The Structural Basis For The Recognition Of Diverse Receptor Sequences By Traf2.
Mol. Cell V. 4 321 1999
(for further references see the
PDB file header
)
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
1b: ACETYL GROUP (ACEb)
1c: ACETYL GROUP (ACEc)
1d: ACETYL GROUP (ACEd)
1e: ACETYL GROUP (ACEe)
1f: ACETYL GROUP (ACEf)
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No.
Name
Count
Type
Full Name
1
ACE
3
Mod. Amino Acid
ACETYL GROUP
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Sites
(2, 2)
Info
All Sites
1: AC4 (SOFTWARE)
2: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC4
SOFTWARE
HOH D:6634
BINDING SITE FOR RESIDUE ACE J 261
2
AC5
SOFTWARE
HOH D:6293
BINDING SITE FOR RESIDUE ACE K 261
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 6)
Info
All PROSITE Patterns/Profiles
1: MATH (A:351-496,B:351-496,C:351-496,D:35...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MATH
PS50144
MATH/TRAF domain profile.
TRAF2_HUMAN
351-496
6
A:351-496
B:351-496
C:351-496
D:351-496
E:351-496
F:351-496
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d1d0aa1 (A:350-501)
1b: SCOP_d1d0ab1 (B:350-501)
1c: SCOP_d1d0ac1 (C:350-501)
1d: SCOP_d1d0ad1 (D:350-501)
1e: SCOP_d1d0ae1 (E:350-501)
1f: SCOP_d1d0af1 (F:350-501)
2a: SCOP_d1d0aa2 (A:334-349)
2b: SCOP_d1d0ab2 (B:334-349)
2c: SCOP_d1d0ac2 (C:334-349)
2d: SCOP_d1d0ad2 (D:334-349)
2e: SCOP_d1d0ae2 (E:334-349)
2f: SCOP_d1d0af2 (F:334-349)
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Protein Domains
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Organisms
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Class
:
All beta proteins
(24004)
Fold
:
TRAF domain-like
(34)
Superfamily
:
TRAF domain-like
(34)
Family
:
MATH domain
(26)
Protein domain
:
TNF receptor associated factor 2 (TRAF2)
(10)
Human (Homo sapiens) [TaxId: 9606]
(10)
1a
d1d0aa1
A:350-501
1b
d1d0ab1
B:350-501
1c
d1d0ac1
C:350-501
1d
d1d0ad1
D:350-501
1e
d1d0ae1
E:350-501
1f
d1d0af1
F:350-501
Class
:
Coiled coil proteins
(689)
Fold
:
Parallel coiled-coil
(407)
Superfamily
:
Trimerization domain of TRAF
(15)
Family
:
Trimerization domain of TRAF
(15)
Protein domain
:
TRAF2
(10)
Human (Homo sapiens) [TaxId: 9606]
(10)
2a
d1d0aa2
A:334-349
2b
d1d0ab2
B:334-349
2c
d1d0ac2
C:334-349
2d
d1d0ad2
D:334-349
2e
d1d0ae2
E:334-349
2f
d1d0af2
F:334-349
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CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_1d0aA00 (A:334-501)
1b: CATH_1d0aB00 (B:334-501)
1c: CATH_1d0aC00 (C:334-501)
1d: CATH_1d0aD00 (D:334-501)
1e: CATH_1d0aE00 (E:334-501)
1f: CATH_1d0aF00 (F:334-501)
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Organisms
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Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A
(23)
Homologous Superfamily
:
Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A
(23)
Human (Homo sapiens)
(21)
1a
1d0aA00
A:334-501
1b
1d0aB00
B:334-501
1c
1d0aC00
C:334-501
1d
1d0aD00
D:334-501
1e
1d0aE00
E:334-501
1f
1d0aF00
F:334-501
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Pfam Domains
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Asym.Unit (180 KB)
Header - Asym.Unit
Biol.Unit 1 (90 KB)
Header - Biol.Unit 1
Biol.Unit 2 (89 KB)
Header - Biol.Unit 2
Biol.Unit 3 (175 KB)
Header - Biol.Unit 3
Biol.Unit 4 (176 KB)
Header - Biol.Unit 4
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