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1CZ7
Asym. Unit
Info
Asym.Unit (244 KB)
Biol.Unit 1 (116 KB)
Biol.Unit 2 (123 KB)
Biol.Unit 3 (242 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF A MINUS-END DIRECTED MICROTUBULE MOTOR PROTEIN NCD REVEALS VARIABLE DIMER CONFORMATIONS
Authors
:
F. K. Kozielski, S. De Bonis, W. Burmeister, C. Cohen-Addad, R. Wade
Date
:
01 Sep 99 (Deposition) - 05 Nov 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: C,D (2x)
Keywords
:
Ncd Crystal Structure, Microtubule Motors, Kinesin Superfamily, Contractile Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
F. Kozielski, S. De Bonis, W. P. Burmeister, C. Cohen-Addad, R. H. Wade
The Crystal Structure Of The Minus-End-Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations.
Structure Fold. Des. V. 7 1407 1999
(for further references see the
PDB file header
)
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
1c: ADENOSINE-5'-DIPHOSPHATE (ADPc)
1d: ADENOSINE-5'-DIPHOSPHATE (ADPd)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
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Label:
No.
Name
Count
Type
Full Name
1
ADP
4
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
MG
4
Ligand/Ion
MAGNESIUM ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:441 , ADP A:800
BINDING SITE FOR RESIDUE MG A 804
2
AC2
SOFTWARE
THR B:441 , ADP B:801
BINDING SITE FOR RESIDUE MG B 805
3
AC3
SOFTWARE
HOH C:37 , THR C:441 , ADP C:802
BINDING SITE FOR RESIDUE MG C 806
4
AC4
SOFTWARE
THR D:441 , ADP D:803
BINDING SITE FOR RESIDUE MG D 807
5
AC5
SOFTWARE
GLN A:435 , THR A:436 , GLY A:437 , SER A:438 , GLY A:439 , LYS A:440 , THR A:441 , TYR A:442 , MG A:804
BINDING SITE FOR RESIDUE ADP A 800
6
AC6
SOFTWARE
GLN B:435 , THR B:436 , GLY B:437 , SER B:438 , GLY B:439 , LYS B:440 , THR B:441 , TYR B:442 , MG B:805
BINDING SITE FOR RESIDUE ADP B 801
7
AC7
SOFTWARE
HOH C:37 , GLN C:435 , THR C:436 , GLY C:437 , SER C:438 , GLY C:439 , LYS C:440 , THR C:441 , TYR C:442 , MG C:806
BINDING SITE FOR RESIDUE ADP C 802
8
AC8
SOFTWARE
GLN D:435 , THR D:436 , GLY D:437 , SER D:438 , GLY D:439 , LYS D:440 , THR D:441 , TYR D:442 , MG D:807
BINDING SITE FOR RESIDUE ADP D 803
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 8)
Info
All PROSITE Patterns/Profiles
1: KINESIN_MOTOR_2 (A:348-670,B:348-668,C:348-669,D:34...)
2: KINESIN_MOTOR_1 (A:574-585,B:574-585,C:574-585,D:57...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
KINESIN_MOTOR_2
PS50067
Kinesin motor domain profile.
NCD_DROME
348-670
4
A:348-670
B:348-668
C:348-669
D:348-670
2
KINESIN_MOTOR_1
PS00411
Kinesin motor domain signature.
NCD_DROME
574-585
4
A:574-585
B:574-585
C:574-585
D:574-585
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1cz7a_ (A:)
1b: SCOP_d1cz7b_ (B:)
1c: SCOP_d1cz7c_ (C:)
1d: SCOP_d1cz7d_ (D:)
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Protein Domains
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Organisms
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(
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Motor proteins
(119)
Protein domain
:
Kinesin motor Ncd (non-claret disjunctional)
(9)
Fruit fly (Drosophila melanogaster) [TaxId: 7227]
(4)
1a
d1cz7a_
A:
1b
d1cz7b_
B:
1c
d1cz7c_
C:
1d
d1cz7d_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1cz7B00 (B:320-668)
1b: CATH_1cz7D00 (D:296-671)
1c: CATH_1cz7A00 (A:320-672)
1d: CATH_1cz7C00 (C:295-669)
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Organisms
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Kinesin
(69)
Homologous Superfamily
:
Kinesin
(69)
Fruit fly (Drosophila melanogaster)
(5)
1a
1cz7B00
B:320-668
1b
1cz7D00
D:296-671
1c
1cz7A00
A:320-672
1d
1cz7C00
C:295-669
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (244 KB)
Header - Asym.Unit
Biol.Unit 1 (116 KB)
Header - Biol.Unit 1
Biol.Unit 2 (123 KB)
Header - Biol.Unit 2
Biol.Unit 3 (242 KB)
Header - Biol.Unit 3
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