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1CM4
Asym. Unit
Info
Asym.Unit (104 KB)
Biol.Unit 1 (97 KB)
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(1)
Title
:
MOTIONS OF CALMODULIN-FOUR-CONFORMER REFINEMENT
Authors
:
M. E. Wall, G. N. Phillips Jr.
Date
:
23 Sep 97 (Deposition) - 04 Mar 98 (Release) - 24 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Ef-Hand Calcium-Binding Protein, Calcium-Binding-Transferase Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. E. Wall, J. B. Clarage, G. N. Phillips Jr.
Motions Of Calmodulin Characterized Using Both Bragg And Diffuse X-Ray Scattering.
Structure V. 5 1599 1997
(for further references see the
PDB file header
)
[
close entry info
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Hetero Components
(1, 17)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
1g: CALCIUM ION (CAg)
1h: CALCIUM ION (CAh)
1i: CALCIUM ION (CAi)
1j: CALCIUM ION (CAj)
1k: CALCIUM ION (CAk)
1l: CALCIUM ION (CAl)
1m: CALCIUM ION (CAm)
1n: CALCIUM ION (CAn)
1o: CALCIUM ION (CAo)
1p: CALCIUM ION (CAp)
1q: CALCIUM ION (CAq)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
17
Ligand/Ion
CALCIUM ION
[
close Hetero Component info
]
Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:20 , ASP A:22 , GLY A:23 , ASP A:24 , THR A:26 , GLU A:31
BINDING SITE FOR RESIDUE CA A 401
02
AC2
SOFTWARE
ASP A:20 , ASP A:22 , GLY A:23 , ASP A:24 , THR A:26 , ILE A:27 , GLU A:31 , HOH A:538
BINDING SITE FOR RESIDUE CA A 402
03
AC3
SOFTWARE
ASP A:20 , ASP A:22 , GLY A:23 , ASP A:24 , THR A:26 , ILE A:27 , GLU A:31 , HOH A:538
BINDING SITE FOR RESIDUE CA A 403
04
AC4
SOFTWARE
ASP A:20 , ASP A:22 , GLY A:23 , ASP A:24 , THR A:26 , GLU A:31 , HOH A:538
BINDING SITE FOR RESIDUE CA A 404
05
AC5
SOFTWARE
ASP A:56 , ALA A:57 , ASP A:58 , GLY A:59 , ASN A:60 , THR A:62 , GLU A:67 , HOH A:541
BINDING SITE FOR RESIDUE CA A 405
06
AC6
SOFTWARE
ASP A:56 , ALA A:57 , ASP A:58 , ASN A:60 , THR A:62 , ASP A:64 , GLU A:67 , HOH A:541
BINDING SITE FOR RESIDUE CA A 406
07
AC7
SOFTWARE
ASP A:56 , ALA A:57 , ASP A:58 , ASN A:60 , THR A:62 , ASP A:64 , GLU A:67 , HOH A:541
BINDING SITE FOR RESIDUE CA A 407
08
AC8
SOFTWARE
ASP A:56 , ALA A:57 , ASP A:58 , ASN A:60 , THR A:62 , GLU A:67
BINDING SITE FOR RESIDUE CA A 408
09
AC9
SOFTWARE
ASP A:93 , ASP A:95 , ASN A:97 , TYR A:99 , GLU A:104 , HOH A:511
BINDING SITE FOR RESIDUE CA A 409
10
BC1
SOFTWARE
ASP A:93 , ASP A:95 , ASN A:97 , TYR A:99 , GLU A:104 , HOH A:511
BINDING SITE FOR RESIDUE CA A 410
11
BC2
SOFTWARE
ASN A:97 , TYR A:99 , ILE A:100 , SER A:101 , GLU A:104 , GLN A:135 , HOH A:511 , HOH A:512
BINDING SITE FOR RESIDUE CA A 411
12
BC3
SOFTWARE
ASP A:93 , ASP A:95 , ASN A:97 , TYR A:99 , GLU A:104 , HOH A:511
BINDING SITE FOR RESIDUE CA A 412
13
BC4
SOFTWARE
ASP A:129 , ASP A:131 , ASP A:133 , GLN A:135 , GLU A:140 , HOH A:531
BINDING SITE FOR RESIDUE CA A 413
14
BC5
SOFTWARE
ASP A:129 , ASP A:131 , ASP A:133 , GLN A:135 , GLU A:140 , HOH A:531
BINDING SITE FOR RESIDUE CA A 414
15
BC6
SOFTWARE
ASP A:129 , ASP A:131 , ASP A:133 , GLN A:135 , GLU A:140 , HOH A:531
BINDING SITE FOR RESIDUE CA A 415
16
BC7
SOFTWARE
ASP A:129 , ASP A:133 , GLN A:135 , GLU A:140 , HOH A:531
BINDING SITE FOR RESIDUE CA A 416
17
BC8
SOFTWARE
ASP A:133 , GLN A:135
BINDING SITE FOR RESIDUE CA A 417
[
close Site info
]
SAPs(SNPs)/Variants
(11, 11)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_069222 (N53I, chain A, )
02: VAR_048585 (M72T, chain A, )
03: VAR_073275 (F89L, chain A, )
04: VAR_073276 (D95V, chain A, )
05: VAR_073277 (N97I, chain A, )
06: VAR_069223 (N97S, chain A, )
07: VAR_073278 (D129G, chain A, )
08: VAR_073279 (D131E, chain A, )
09: VAR_073280 (D133H, chain A, )
10: VAR_073281 (Q135P, chain A, )
11: VAR_073282 (F141L, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_069222
N
54
I
CALM_HUMAN
Disease (CPVT4)
---
A
N
53
I
02
UniProt
VAR_048585
M
73
T
CALM_HUMAN
Polymorphism
41389749
A
M
72
T
03
UniProt
VAR_073275
F
90
L
CALM_HUMAN
Disease (LQT14)
---
A
F
89
L
04
UniProt
VAR_073276
D
96
V
CALM_HUMAN
Disease (LQT15)
---
A
D
95
V
05
UniProt
VAR_073277
N
98
I
CALM_HUMAN
Disease (LQT15)
---
A
N
97
I
06
UniProt
VAR_069223
N
98
S
CALM_HUMAN
Disease (CPVT4)
---
A
N
97
S
07
UniProt
VAR_073278
D
130
G
CALM_HUMAN
Disease (LQT14)
---
A
D
129
G
08
UniProt
VAR_073279
D
132
E
CALM_HUMAN
Disease (LQT15)
---
A
D
131
E
09
UniProt
VAR_073280
D
134
H
CALM_HUMAN
Disease (LQT15)
---
A
D
133
H
10
UniProt
VAR_073281
Q
136
P
CALM_HUMAN
Disease (LQT15)
---
A
Q
135
P
11
UniProt
VAR_073282
F
142
L
CALM_HUMAN
Disease (LQT14)
---
A
F
141
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 10)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (A:7-42|A:43-78|A:80-115|A:116-142,...)
2: EF_HAND_1 (A:20-32|A:56-68|A:93-105|A:129-141...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
CALM_ORYLA
1-36
37-72
74-109
110-136
4
A:7-42
A:43-78
A:80-115
A:116-142
CALM1_HUMAN
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM_ANAPL
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM_BOVIN
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM_CHICK
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CAM2B_XENLA
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM_RABIT
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM_TETCF
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CAM2A_XENLA
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM3_MOUSE
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM3_RAT
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALMA_ARBPU
8-43
44-79
81-116
117-142
4
A:7-42
A:43-78
A:80-115
A:116-141
CALM_ONCSP
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM1_MOUSE
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM1_RAT
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM1_XENLA
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM2_HUMAN
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM2_MOUSE
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM2_RAT
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
CALM3_HUMAN
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
CALM_ORYLA
14-26
50-62
87-99
123-135
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM1_HUMAN
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM_ANAPL
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM_BOVIN
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM_CHICK
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CAM2B_XENLA
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM_RABIT
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM_TETCF
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CAM2A_XENLA
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM3_MOUSE
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM3_RAT
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALMA_ARBPU
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM_ONCSP
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM1_MOUSE
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM1_RAT
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM1_XENLA
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM2_HUMAN
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM2_MOUSE
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM2_RAT
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
CALM3_HUMAN
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
[
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]
Exons
(0, 0)
Info
All Exons
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1cm4a_ (A:)
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(
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(
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Folds
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
Calmodulin-like
(356)
Protein domain
:
Calmodulin
(152)
Cow (Bos taurus) [TaxId: 9913]
(16)
1a
d1cm4a_
A:
[
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1cm4A00 (A:4-146)
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(
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Recoverin; domain 1
(474)
Homologous Superfamily
:
EF-hand
(412)
Cattle (Bos taurus)
(44)
1a
1cm4A00
A:4-146
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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