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1CL3
Asym. Unit
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Asym.Unit (936 KB)
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Models
(25 )
Title
:
MOLECULAR INSIGHTS INTO PEBP2/CBF-SMMHC ASSOCIATED ACUTE LEUKEMIA REVEALED FROM THE THREE-DIMENSIONAL STRUCTURE OF PEBP2/CBF BETA
Authors
:
M. Goger, V. Gupta, W. Y. Kim, K. Shigesada, Y. Ito, M. H. Werner
Date
:
04 May 99 (Deposition) - 01 Jan 00 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (25 x)
Keywords
:
Structure From Molmol, Core-Binding Factor, Gene Regulation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Goger, V. Gupta, W. Y. Kim, K. Shigesada, Y. Ito, M. H. Werner
Molecular Insights Into Pebp2/Cbf Beta-Smmhc Associated Acute Leukemia Revealed From The Structure Of Pebp2/Cbf Beta
Nat. Struct. Biol. V. 6 620 1999
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_036226 (P100A, chain A, )
2: VAR_PEBB_HUMAN_CCDS10827_1_01 (P100A, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_036226
P
100
A
PEBB_HUMAN
Unclassified
---
A
P
100
A
2
CancerSNP
VAR_PEBB_HUMAN_CCDS10827_1_01
*
P
100
A
PEBB_HUMAN
Disease (Breast cancer)
---
A
P
100
A
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
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;
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Exons
(5, 5)
Info
All Exons
Exon 1.1 (A:4-26)
Exon 1.2 (A:27-55)
Exon 1.3 (A:56-94)
Exon 1.4 (A:95-133)
Exon 1.5b (A:134-141)
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1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/1.4
5: Boundary 1.4/1.5b
6: Boundary 1.5b/1.6b
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000290858
1
ENSE00001297396
chr16:
67063050-67063388
339
PEBB_HUMAN
1-26
26
1
A:4-26
23
1.2
ENST00000290858
2
ENSE00000688453
chr16:
67063630-67063716
87
PEBB_HUMAN
27-55
29
1
A:27-55
29
1.3
ENST00000290858
3
ENSE00000688463
chr16:
67070542-67070658
117
PEBB_HUMAN
56-94
39
1
A:56-94
39
1.4
ENST00000290858
4
ENSE00001046833
chr16:
67100585-67100701
117
PEBB_HUMAN
95-133
39
1
A:95-133
39
1.5b
ENST00000290858
5b
ENSE00001301640
chr16:
67116116-67116242
127
PEBB_HUMAN
134-176
43
1
A:134-141
8
1.6b
ENST00000290858
6b
ENSE00001597074
chr16:
67132613-67134961
2349
PEBB_HUMAN
176-182
7
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1cl3a_ (A:)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Core binding factor beta, CBF
(6)
Superfamily
:
Core binding factor beta, CBF
(6)
Family
:
Core binding factor beta, CBF
(6)
Protein domain
:
Core binding factor beta, CBF
(6)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d1cl3a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1cl3A00 (A:4-141)
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Organisms
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Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Polyomavirus Enhancer Binding Protein 2; Chain: A;
(6)
Homologous Superfamily
:
[code=2.40.250.10, no name defined]
(6)
Human (Homo sapiens)
(3)
1a
1cl3A00
A:4-141
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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