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1CKJ
Asym. Unit
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Asym.Unit (104 KB)
Biol.Unit 1 (100 KB)
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(1)
Title
:
CASEIN KINASE I DELTA TRUNCATION MUTANT CONTAINING RESIDUES 1-317 COMPLEX WITH BOUND TUNGSTATE
Authors
:
K. L. Longenecker, P. J. Roach, T. D. Hurley
Date
:
25 Aug 95 (Deposition) - 07 Dec 95 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.46
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Protein Kinase, Phosphotransferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. L. Longenecker, P. J. Roach, T. D. Hurley
Three-Dimensional Structure Of Mammalian Casein Kinase I: Molecular Basis For Phosphate Recognition.
J. Mol. Biol. V. 257 618 1996
(for further references see the
PDB file header
)
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Hetero Components
(1, 5)
Info
All Hetero Components
1a: TUNGSTATE(VI)ION (WO4a)
1b: TUNGSTATE(VI)ION (WO4b)
1c: TUNGSTATE(VI)ION (WO4c)
1d: TUNGSTATE(VI)ION (WO4d)
1e: TUNGSTATE(VI)ION (WO4e)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
WO4
5
Ligand/Ion
TUNGSTATE(VI)ION
[
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]
Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:183 , GLY A:220 , LYS A:229
BINDING SITE FOR RESIDUE WO4 A 400
2
AC2
SOFTWARE
HIS A:167 , LYS A:268 , HOH A:419
BINDING SITE FOR RESIDUE WO4 A 401
3
AC3
SOFTWARE
ARG B:183 , GLN B:219 , GLY B:220 , LYS B:229
BINDING SITE FOR RESIDUE WO4 B 400
4
AC4
SOFTWARE
ARG B:130 , LYS B:159
BINDING SITE FOR RESIDUE WO4 B 402
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:18-41,B:18-41)
2: PROTEIN_KINASE_ST (A:127-139,B:127-139)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
KC1D_RAT
15-38
2
A:18-41
B:18-41
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
KC1D_RAT
124-136
2
A:127-139
B:127-139
[
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]
Exons
(10, 19)
Info
All Exons
Exon 1.1 (A:1-29 (gaps) | B:1-29 (gaps))
Exon 1.3 (A:29-66 | B:29-66)
Exon 1.4 (A:66-115 | B:66-115)
Exon 1.5 (A:116-194 (gaps) | B:116-194 (gaps...)
Exon 1.6 (A:194-251 | B:194-251)
Exon 1.7a (A:251-270 | B:251-270)
Exon 1.7c (A:271-293 | B:271-293)
Exon 1.7d (A:294-296 | B:294-296)
Exon 1.7f (A:297-299 | B:297-298)
Exon 1.8b (A:300-301 | -)
View:
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All Exon Boundaries
01: Boundary -/1.1
02: Boundary 1.1/1.3
03: Boundary 1.3/1.4
04: Boundary 1.4/1.5
05: Boundary 1.5/1.6
06: Boundary 1.6/1.7a
07: Boundary 1.7a/1.7c
08: Boundary 1.7c/1.7d
09: Boundary 1.7d/1.7f
10: Boundary 1.7f/1.8b
11: Boundary 1.8b/1.9
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000054936
1
ENSRNOE00000268736
chr10:
110197233-110196844
390
KC1D_RAT
1-26
26
2
A:1-29 (gaps)
B:1-29 (gaps)
29
29
1.3
ENSRNOT00000054936
3
ENSRNOE00000370427
chr10:
110189147-110189037
111
KC1D_RAT
26-63
38
2
A:29-66
B:29-66
38
38
1.4
ENSRNOT00000054936
4
ENSRNOE00000370426
chr10:
110178866-110178718
149
KC1D_RAT
63-112
50
2
A:66-115
B:66-115
50
50
1.5
ENSRNOT00000054936
5
ENSRNOE00000370425
chr10:
110177871-110177643
229
KC1D_RAT
113-189
77
2
A:116-194 (gaps)
B:116-194 (gaps)
79
79
1.6
ENSRNOT00000054936
6
ENSRNOE00000453989
chr10:
110177233-110177063
171
KC1D_RAT
189-246
58
2
A:194-251
B:194-251
58
58
1.7a
ENSRNOT00000054936
7a
ENSRNOE00000370422
chr10:
110176341-110176283
59
KC1D_RAT
246-265
20
2
A:251-270
B:251-270
20
20
1.7c
ENSRNOT00000054936
7c
ENSRNOE00000370421
chr10:
110176280-110176212
69
KC1D_RAT
266-288
23
2
A:271-293
B:271-293
23
23
1.7d
ENSRNOT00000054936
7d
ENSRNOE00000439162
chr10:
110176210-110176202
9
KC1D_RAT
289-291
3
2
A:294-296
B:294-296
3
3
1.7f
ENSRNOT00000054936
7f
ENSRNOE00000451221
chr10:
110176200-110176192
9
KC1D_RAT
292-294
3
2
A:297-299
B:297-298
3
2
1.8b
ENSRNOT00000054936
8b
ENSRNOE00000370419
chr10:
110173891-110173720
172
KC1D_RAT
295-352
58
1
A:300-301
-
2
-
1.9
ENSRNOT00000054936
9
ENSRNOE00000370418
chr10:
110172594-110172455
140
KC1D_RAT
352-398
47
0
-
-
1.11
ENSRNOT00000054936
11
ENSRNOE00000370414
chr10:
110168360-110166244
2117
KC1D_RAT
399-414
16
0
-
-
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1ckja_ (A:)
1b: SCOP_d1ckjb_ (B:)
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Protein Domains
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(
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Organisms
(
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(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
Casein kinase-1, CK1
(12)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(2)
1a
d1ckja_
A:
1b
d1ckjb_
B:
[
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1ckjA01 (A:15-28,A:39-88)
1b: CATH_1ckjB01 (B:15-28,B:39-88)
2a: CATH_1ckjB02 (B:89-298)
2b: CATH_1ckjA02 (A:89-301)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Norway rat (Rattus norvegicus)
(16)
1a
1ckjA01
A:15-28,A:39-88
1b
1ckjB01
B:15-28,B:39-88
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Norway rat (Rattus norvegicus)
(19)
2a
1ckjB02
B:89-298
2b
1ckjA02
A:89-301
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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