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1CJP
Asym. Unit
Info
Asym.Unit (158 KB)
Biol.Unit 1 (152 KB)
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(1)
Title
:
CONCANAVALIN A COMPLEX WITH 4'-METHYLUMBELLIFERYL-ALPHA-D-GLUCOPYRANOSIDE
Authors
:
S. J. Hamodrakas, P. N. Kanellopoulos, P. A. Tucker
Date
:
03 Oct 96 (Deposition) - 15 Oct 97 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.78
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Legume Lectin
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. J. Hamodrakas, P. N. Kanellopoulos, K. Pavlou, P. A. Tucker
The Crystal Structure Of The Complex Of Concanavalin A With 4'-Methylumbelliferyl-Alpha-D-Glucopyranoside.
J. Struct. Biol. V. 118 23 1997
(for further references see the
PDB file header
)
[
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Hetero Components
(3, 12)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
2a: MANGANESE (II) ION (MNa)
2b: MANGANESE (II) ION (MNb)
2c: MANGANESE (II) ION (MNc)
2d: MANGANESE (II) ION (MNd)
3a: 4-METHYLUMBELLIFERYL-ALPHA-D-GLUCO... (MUGa)
3b: 4-METHYLUMBELLIFERYL-ALPHA-D-GLUCO... (MUGb)
3c: 4-METHYLUMBELLIFERYL-ALPHA-D-GLUCO... (MUGc)
3d: 4-METHYLUMBELLIFERYL-ALPHA-D-GLUCO... (MUGd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
4
Ligand/Ion
CALCIUM ION
2
MN
4
Ligand/Ion
MANGANESE (II) ION
3
MUG
4
Ligand/Ion
4-METHYLUMBELLIFERYL-ALPHA-D-GLUCOSE
[
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:12 , ASN A:14 , GLY A:98 , LEU A:99 , TYR A:100 , ALA A:207 , ASP A:208 , GLY A:227 , ARG A:228 , MUG C:240
BINDING SITE FOR RESIDUE MUG A 240
02
AC2
SOFTWARE
TYR B:12 , ASN B:14 , GLY B:98 , LEU B:99 , TYR B:100 , ALA B:207 , ASP B:208 , ARG B:228
BINDING SITE FOR RESIDUE MUG B 240
03
AC3
SOFTWARE
MUG A:240 , TYR C:12 , ASN C:14 , GLY C:98 , LEU C:99 , TYR C:100 , ALA C:207 , ASP C:208 , ARG C:228 , HOH C:274 , ASP D:16
BINDING SITE FOR RESIDUE MUG C 240
04
AC4
SOFTWARE
THR C:15 , ASP C:16 , HOH C:279 , TYR D:12 , ASN D:14 , GLY D:98 , LEU D:99 , TYR D:100 , ALA D:207 , ASP D:208 , ARG D:228
BINDING SITE FOR RESIDUE MUG D 240
05
AC5
SOFTWARE
GLU A:8 , ASP A:10 , ASP A:19 , HIS A:24 , HOH A:241 , HOH A:242
BINDING SITE FOR RESIDUE MN A 238
06
AC6
SOFTWARE
ASP A:10 , TYR A:12 , ASN A:14 , ASP A:19 , HOH A:243 , HOH A:244
BINDING SITE FOR RESIDUE CA A 239
07
AC7
SOFTWARE
GLU B:8 , ASP B:10 , ASP B:19 , HIS B:24 , HOH B:242 , HOH B:243
BINDING SITE FOR RESIDUE MN B 238
08
AC8
SOFTWARE
ASP B:10 , TYR B:12 , ASN B:14 , ASP B:19 , HOH B:241 , HOH B:244
BINDING SITE FOR RESIDUE CA B 239
09
AC9
SOFTWARE
GLU C:8 , ASP C:10 , ASP C:19 , HIS C:24 , HOH C:241 , HOH C:242
BINDING SITE FOR RESIDUE MN C 238
10
BC1
SOFTWARE
ASP C:10 , TYR C:12 , ASN C:14 , ASP C:19 , HOH C:243 , HOH C:244
BINDING SITE FOR RESIDUE CA C 239
11
BC2
SOFTWARE
GLU D:8 , ASP D:10 , ASP D:19 , HIS D:24 , HOH D:241 , HOH D:242
BINDING SITE FOR RESIDUE MN D 238
12
BC3
SOFTWARE
ASP D:10 , TYR D:12 , ASN D:14 , ASP D:19 , HOH D:243 , HOH D:244
BINDING SITE FOR RESIDUE CA D 239
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1cjpa_ (A:)
1b: SCOP_d1cjpb_ (B:)
1c: SCOP_d1cjpc_ (C:)
1d: SCOP_d1cjpd_ (D:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
Legume lectins
(238)
Protein domain
:
Concanavalin A
(59)
Jack bean (Canavalia ensiformis) [TaxId: 3823]
(52)
1a
d1cjpa_
A:
1b
d1cjpb_
B:
1c
d1cjpc_
C:
1d
d1cjpd_
D:
[
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1cjpA00 (A:1-237)
1b: CATH_1cjpB00 (B:1-237)
1c: CATH_1cjpC00 (C:1-237)
1d: CATH_1cjpD00 (D:1-237)
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Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.200, no name defined]
(421)
Jack bean (Canavalia ensiformis)
(50)
1a
1cjpA00
A:1-237
1b
1cjpB00
B:1-237
1c
1cjpC00
C:1-237
1d
1cjpD00
D:1-237
[
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (158 KB)
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