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1C30
Biol. Unit 1
Info
Asym.Unit (999 KB)
Biol.Unit 1 (982 KB)
Biol.Unit 2 (254 KB)
Biol.Unit 3 (262 KB)
Biol.Unit 4 (258 KB)
Biol.Unit 5 (263 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CARBAMOYL PHOSPHATE SYNTHETASE: SMALL SUBUNIT MUTATION C269S
Authors
:
J. B. Thoden, X. Huang, F. M. Raushel, H. M. Holden
Date
:
24 Jul 99 (Deposition) - 10 Dec 99 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D,E,F,G,H (1x)
Biol. Unit 2: G,H (1x)
Biol. Unit 3: A,B (1x)
Biol. Unit 4: C,D (1x)
Biol. Unit 5: E,F (1x)
Keywords
:
Amidotransferase, Atp-Grasp, Substrate Channeling, Ligase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. B. Thoden, X. Huang, F. M. Raushel, H. M. Holden
The Small Subunit Of Carbamoyl Phosphate Synthetase: Snapshots Along The Reaction Pathway.
Biochemistry V. 38 16158 1999
[
close entry info
]
Hetero Components
(4, 22)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
1c: ADENOSINE-5'-DIPHOSPHATE (ADPc)
1d: ADENOSINE-5'-DIPHOSPHATE (ADPd)
1e: ADENOSINE-5'-DIPHOSPHATE (ADPe)
1f: ADENOSINE-5'-DIPHOSPHATE (ADPf)
1g: ADENOSINE-5'-DIPHOSPHATE (ADPg)
1h: ADENOSINE-5'-DIPHOSPHATE (ADPh)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
2e: CHLORIDE ION (CLe)
2f: CHLORIDE ION (CLf)
2g: CHLORIDE ION (CLg)
2h: CHLORIDE ION (CLh)
2i: CHLORIDE ION (CLi)
2j: CHLORIDE ION (CLj)
2k: CHLORIDE ION (CLk)
2l: CHLORIDE ION (CLl)
2m: CHLORIDE ION (CLm)
2n: CHLORIDE ION (CLn)
2o: CHLORIDE ION (CLo)
2p: CHLORIDE ION (CLp)
3a: POTASSIUM ION (Ka)
3aa: POTASSIUM ION (Kaa)
3ab: POTASSIUM ION (Kab)
3ac: POTASSIUM ION (Kac)
3ad: POTASSIUM ION (Kad)
3ae: POTASSIUM ION (Kae)
3af: POTASSIUM ION (Kaf)
3b: POTASSIUM ION (Kb)
3c: POTASSIUM ION (Kc)
3d: POTASSIUM ION (Kd)
3e: POTASSIUM ION (Ke)
3f: POTASSIUM ION (Kf)
3g: POTASSIUM ION (Kg)
3h: POTASSIUM ION (Kh)
3i: POTASSIUM ION (Ki)
3j: POTASSIUM ION (Kj)
3k: POTASSIUM ION (Kk)
3l: POTASSIUM ION (Kl)
3m: POTASSIUM ION (Km)
3n: POTASSIUM ION (Kn)
3o: POTASSIUM ION (Ko)
3p: POTASSIUM ION (Kp)
3q: POTASSIUM ION (Kq)
3r: POTASSIUM ION (Kr)
3s: POTASSIUM ION (Ks)
3t: POTASSIUM ION (Kt)
3u: POTASSIUM ION (Ku)
3v: POTASSIUM ION (Kv)
3w: POTASSIUM ION (Kw)
3x: POTASSIUM ION (Kx)
3y: POTASSIUM ION (Ky)
3z: POTASSIUM ION (Kz)
4a: MANGANESE (II) ION (MNa)
4b: MANGANESE (II) ION (MNb)
4c: MANGANESE (II) ION (MNc)
4d: MANGANESE (II) ION (MNd)
4e: MANGANESE (II) ION (MNe)
4f: MANGANESE (II) ION (MNf)
4g: MANGANESE (II) ION (MNg)
4h: MANGANESE (II) ION (MNh)
4i: MANGANESE (II) ION (MNi)
4j: MANGANESE (II) ION (MNj)
4k: MANGANESE (II) ION (MNk)
4l: MANGANESE (II) ION (MNl)
5a: TETRAETHYLAMMONIUM ION (NETa)
5b: TETRAETHYLAMMONIUM ION (NETb)
5c: TETRAETHYLAMMONIUM ION (NETc)
5d: TETRAETHYLAMMONIUM ION (NETd)
6a: L-ORNITHINE (ORNa)
6b: L-ORNITHINE (ORNb)
6c: L-ORNITHINE (ORNc)
6d: L-ORNITHINE (ORNd)
7a: PHOSPHATE ION (PO4a)
7b: PHOSPHATE ION (PO4b)
7c: PHOSPHATE ION (PO4c)
7d: PHOSPHATE ION (PO4d)
7e: PHOSPHATE ION (PO4e)
7f: PHOSPHATE ION (PO4f)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ADP
8
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
K
-1
Ligand/Ion
POTASSIUM ION
4
MN
-1
Ligand/Ion
MANGANESE (II) ION
5
NET
4
Ligand/Ion
TETRAETHYLAMMONIUM ION
6
ORN
4
Ligand/Ion
L-ORNITHINE
7
PO4
6
Ligand/Ion
PHOSPHATE ION
[
close Hetero Component info
]
Sites
(82, 82)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
61: GC7 (SOFTWARE)
62: GC8 (SOFTWARE)
63: GC9 (SOFTWARE)
64: HC1 (SOFTWARE)
65: HC2 (SOFTWARE)
66: HC3 (SOFTWARE)
67: HC4 (SOFTWARE)
68: HC5 (SOFTWARE)
69: HC6 (SOFTWARE)
70: HC7 (SOFTWARE)
71: HC8 (SOFTWARE)
72: HC9 (SOFTWARE)
73: IC1 (SOFTWARE)
74: IC2 (SOFTWARE)
75: IC3 (SOFTWARE)
76: IC4 (SOFTWARE)
77: IC5 (SOFTWARE)
78: IC6 (SOFTWARE)
79: IC7 (SOFTWARE)
80: IC8 (SOFTWARE)
81: IC9 (SOFTWARE)
82: JC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:299 , ASN A:301 , ADP A:4000 , PO4 A:4005 , HOH A:4139
BINDING SITE FOR RESIDUE MN A 4001
02
AC2
SOFTWARE
GLN A:285 , GLU A:299 , ADP A:4000 , PO4 A:4005 , HOH A:4136
BINDING SITE FOR RESIDUE MN A 4002
03
AC3
SOFTWARE
GLU A:215 , ASN A:236 , ASP A:238 , ALA A:239 , ILE A:242 , SER A:247
BINDING SITE FOR RESIDUE K A 4003
04
AC4
SOFTWARE
ALA A:126 , GLU A:127 , GLU A:299 , MET A:300 , ASN A:301 , HOH A:4137 , HOH A:4139 , HOH A:4140
BINDING SITE FOR RESIDUE K A 4004
05
AC5
SOFTWARE
GLN A:829 , GLU A:841 , ADP A:4006 , HOH A:4580 , HOH A:4850
BINDING SITE FOR RESIDUE MN A 4007
06
AC6
SOFTWARE
GLU A:841 , ASN A:843 , ADP A:4006
BINDING SITE FOR RESIDUE K A 4008
07
AC7
SOFTWARE
GLU A:761 , HIS A:781 , GLU A:783 , GLN A:784 , VAL A:787 , SER A:792
BINDING SITE FOR RESIDUE K A 4009
08
AC8
SOFTWARE
GLN A:93 , THR A:173 , MET A:174 , HOH A:4078
BINDING SITE FOR RESIDUE CL A 4012
09
AC9
SOFTWARE
ASN A:289 , ASN A:292 , ARG A:294
BINDING SITE FOR RESIDUE CL A 4013
10
BC1
SOFTWARE
ASN A:371 , PHE A:900 , PRO A:901 , GLY A:902
BINDING SITE FOR RESIDUE CL A 4014
11
BC2
SOFTWARE
HOH A:4567 , ASP B:114
BINDING SITE FOR RESIDUE CL B 4015
12
BC3
SOFTWARE
HOH A:4567 , HIS B:16 , ASP B:112 , HOH B:4068 , HOH B:4069
BINDING SITE FOR RESIDUE K B 4016
13
BC4
SOFTWARE
GLU A:217 , THR A:244 , ASN A:283 , GLN A:285 , PO4 A:4005 , HOH A:4145
BINDING SITE FOR RESIDUE K A 4017
14
BC5
SOFTWARE
ASP A:84 , GLY A:112 , THR A:114 , HOH A:4156 , HOH A:4158
BINDING SITE FOR RESIDUE K A 4018
15
BC6
SOFTWARE
THR A:143 , ALA A:144 , HOH A:4244 , HOH A:4250
BINDING SITE FOR RESIDUE K A 4019
16
BC7
SOFTWARE
GLU C:299 , ASN C:301 , ADP C:4020 , K C:4024 , PO4 C:4025 , HOH C:4104
BINDING SITE FOR RESIDUE MN C 4021
17
BC8
SOFTWARE
GLN C:285 , GLU C:299 , ADP C:4020 , PO4 C:4025 , K C:4037 , HOH C:4101
BINDING SITE FOR RESIDUE MN C 4022
18
BC9
SOFTWARE
GLU C:215 , ASN C:236 , ASP C:238 , ALA C:239 , ILE C:242 , SER C:247
BINDING SITE FOR RESIDUE K C 4023
19
CC1
SOFTWARE
ASP E:84 , GLY E:112 , THR E:114 , HOH E:4164 , HOH E:4165 , HOH E:4167
BINDING SITE FOR RESIDUE K E 4059
20
CC2
SOFTWARE
ALA C:126 , GLU C:127 , GLU C:299 , MET C:300 , ASN C:301 , MN C:4021 , HOH C:4105 , HOH C:4645
BINDING SITE FOR RESIDUE K C 4024
21
CC3
SOFTWARE
THR E:143 , ALA E:144
BINDING SITE FOR RESIDUE K E 4060
22
CC4
SOFTWARE
GLN C:829 , GLU C:841 , ADP C:4026 , HOH C:4530 , HOH C:4531
BINDING SITE FOR RESIDUE MN C 4027
23
CC5
SOFTWARE
GLU G:299 , ASN G:301 , ADP G:4062 , MN G:4064 , K G:4066 , PO4 G:4067 , HOH G:4152
BINDING SITE FOR RESIDUE MN G 4063
24
CC6
SOFTWARE
GLU C:841 , ASN C:843 , ADP C:4026 , HOH C:4114
BINDING SITE FOR RESIDUE K C 4028
25
CC7
SOFTWARE
GLN G:285 , GLU G:299 , ADP G:4062 , MN G:4063 , PO4 G:4067 , K G:4079 , HOH G:4149
BINDING SITE FOR RESIDUE MN G 4064
26
CC8
SOFTWARE
GLU C:761 , HIS C:781 , GLU C:783 , GLN C:784 , VAL C:787 , SER C:792
BINDING SITE FOR RESIDUE K C 4029
27
CC9
SOFTWARE
GLU G:215 , ASN G:236 , ASP G:238 , ALA G:239 , ILE G:242 , SER G:247
BINDING SITE FOR RESIDUE K G 4065
28
DC1
SOFTWARE
THR C:173 , MET C:174
BINDING SITE FOR RESIDUE CL C 4032
29
DC2
SOFTWARE
ALA G:126 , GLU G:127 , GLU G:299 , MET G:300 , ASN G:301 , MN G:4063 , HOH G:4150 , HOH G:4152 , HOH G:4153
BINDING SITE FOR RESIDUE K G 4066
30
DC3
SOFTWARE
ASN C:289 , ASN C:292 , ARG C:294
BINDING SITE FOR RESIDUE CL C 4033
31
DC4
SOFTWARE
SER G:789 , GLN G:829 , GLU G:841 , ADP G:4068
BINDING SITE FOR RESIDUE MN G 4069
32
DC5
SOFTWARE
ALA C:370 , ASN C:371 , PHE C:900 , PRO C:901 , GLY C:902
BINDING SITE FOR RESIDUE CL C 4034
33
DC6
SOFTWARE
GLU G:841 , ASN G:843 , ADP G:4068
BINDING SITE FOR RESIDUE K G 4070
34
DC7
SOFTWARE
ASP D:114 , HOH D:1598
BINDING SITE FOR RESIDUE CL D 4035
35
DC8
SOFTWARE
GLU G:761 , HIS G:781 , GLU G:783 , GLN G:784 , VAL G:787 , SER G:792
BINDING SITE FOR RESIDUE K G 4071
36
DC9
SOFTWARE
HOH C:4519 , HIS D:16 , ASP D:112 , HOH D:1602 , HOH D:1603
BINDING SITE FOR RESIDUE K D 4036
37
EC1
SOFTWARE
THR G:173 , MET G:174 , HOH G:4087
BINDING SITE FOR RESIDUE CL G 4074
38
EC2
SOFTWARE
GLU C:217 , THR C:244 , ASN C:283 , GLN C:285 , MN C:4022 , PO4 C:4025 , HOH C:4110
BINDING SITE FOR RESIDUE K C 4037
39
EC3
SOFTWARE
ASN G:289 , ASN G:292 , ARG G:294
BINDING SITE FOR RESIDUE CL G 4075
40
EC4
SOFTWARE
ASP C:84 , GLY C:112 , THR C:114
BINDING SITE FOR RESIDUE K C 4038
41
EC5
SOFTWARE
ALA G:370 , ASN G:371 , PHE G:900 , PRO G:901 , GLY G:902
BINDING SITE FOR RESIDUE CL G 4076
42
EC6
SOFTWARE
THR C:143 , ALA C:144 , HOH C:4203 , HOH C:4208
BINDING SITE FOR RESIDUE K C 4039
43
EC7
SOFTWARE
PHE H:15 , ASP H:114
BINDING SITE FOR RESIDUE CL H 4077
44
EC8
SOFTWARE
GLU E:299 , ASN E:301 , ADP E:4041 , MN E:4043 , PO4 E:4046 , HOH E:4143
BINDING SITE FOR RESIDUE MN E 4042
45
EC9
SOFTWARE
HIS H:16 , ASP H:112 , HOH H:3632
BINDING SITE FOR RESIDUE K H 4078
46
FC1
SOFTWARE
GLN E:285 , GLU E:299 , ADP E:4041 , MN E:4042 , PO4 E:4046 , HOH E:4140
BINDING SITE FOR RESIDUE MN E 4043
47
FC2
SOFTWARE
GLU G:217 , THR G:244 , ASN G:283 , GLN G:285 , MN G:4064 , PO4 G:4067 , HOH G:4158
BINDING SITE FOR RESIDUE K G 4079
48
FC3
SOFTWARE
GLU E:215 , ASN E:236 , ASP E:238 , ALA E:239 , ILE E:242 , SER E:247
BINDING SITE FOR RESIDUE K E 4044
49
FC4
SOFTWARE
ASP G:84 , GLY G:112 , THR G:114 , HOH G:4172
BINDING SITE FOR RESIDUE K G 4080
50
FC5
SOFTWARE
ALA E:126 , GLU E:127 , GLU E:299 , MET E:300 , ASN E:301 , HOH E:4144
BINDING SITE FOR RESIDUE K E 4045
51
FC6
SOFTWARE
THR G:143 , ALA G:144 , HOH G:4246 , HOH G:4251
BINDING SITE FOR RESIDUE K G 4081
52
FC7
SOFTWARE
GLN E:829 , GLU E:841 , ADP E:4047 , HOH E:4578 , HOH E:4579
BINDING SITE FOR RESIDUE MN E 4048
53
FC8
SOFTWARE
GLU E:841 , ASN E:843 , ADP E:4047 , HOH E:4153
BINDING SITE FOR RESIDUE K E 4049
54
FC9
SOFTWARE
GLU E:761 , HIS E:781 , GLU E:783 , GLN E:784 , VAL E:787 , SER E:792
BINDING SITE FOR RESIDUE K E 4050
55
GC1
SOFTWARE
MET E:174 , NET E:4052 , HOH E:4084
BINDING SITE FOR RESIDUE CL E 4053
56
GC2
SOFTWARE
ASN E:289 , ARG E:294
BINDING SITE FOR RESIDUE CL E 4054
57
GC3
SOFTWARE
ASN E:371 , PRO E:901 , GLY E:902
BINDING SITE FOR RESIDUE CL E 4055
58
GC4
SOFTWARE
GLU E:549 , ASP F:114 , HOH F:2540
BINDING SITE FOR RESIDUE CL F 4056
59
GC5
SOFTWARE
HIS F:16 , ASP F:112 , HOH F:2541 , HOH F:2544 , HOH F:2545
BINDING SITE FOR RESIDUE K F 4057
60
GC6
SOFTWARE
GLU E:217 , THR E:244 , ASN E:283 , GLN E:285 , PO4 E:4046
BINDING SITE FOR RESIDUE K E 4058
61
GC7
SOFTWARE
MET E:174 , GLY E:175 , HIS E:243 , GLN E:285 , GLU E:299 , ASN E:301 , ARG E:303 , ARG E:306 , ADP E:4041 , MN E:4042 , MN E:4043 , K E:4058 , HOH E:4149 , HOH E:4150
BINDING SITE FOR RESIDUE PO4 E 4046
62
GC8
SOFTWARE
GLU E:560
BINDING SITE FOR RESIDUE PO4 E 4061
63
GC9
SOFTWARE
MET G:174 , GLY G:175 , HIS G:243 , GLN G:285 , GLU G:299 , ASN G:301 , ARG G:303 , ARG G:306 , ADP G:4062 , MN G:4063 , MN G:4064 , K G:4079 , HOH G:4149 , HOH G:4158 , HOH G:4159
BINDING SITE FOR RESIDUE PO4 G 4067
64
HC1
SOFTWARE
MET A:174 , GLY A:175 , HIS A:243 , GLN A:285 , GLU A:299 , ASN A:301 , ARG A:303 , ARG A:306 , ADP A:4000 , MN A:4001 , MN A:4002 , K A:4017 , HOH A:4145 , HOH A:4146
BINDING SITE FOR RESIDUE PO4 A 4005
65
HC2
SOFTWARE
MET C:174 , GLY C:175 , HIS C:243 , GLN C:285 , GLU C:299 , ASN C:301 , ARG C:303 , ARG C:306 , ADP C:4020 , MN C:4021 , MN C:4022 , K C:4037 , HOH C:4110 , HOH C:4111
BINDING SITE FOR RESIDUE PO4 C 4025
66
HC3
SOFTWARE
ASP C:518
BINDING SITE FOR RESIDUE PO4 C 4040
67
HC4
SOFTWARE
GLU A:783 , ASP A:791 , ALA A:793 , GLU A:892 , LEU A:907 , TYR A:1040 , ASP A:1041 , THR A:1042 , HOH A:4102 , HOH A:4131
BINDING SITE FOR RESIDUE ORN A 4010
68
HC5
SOFTWARE
HOH A:4895 , HOH A:4896 , GLU C:783 , ASP C:791 , ALA C:793 , GLU C:892 , VAL C:893 , TYR C:1040 , ASP C:1041 , THR C:1042
BINDING SITE FOR RESIDUE ORN A 4030
69
HC6
SOFTWARE
HOH A:4898 , GLU E:783 , ASP E:791 , GLU E:892 , VAL E:893 , TYR E:1040 , ASP E:1041 , THR E:1042
BINDING SITE FOR RESIDUE ORN A 4051
70
HC7
SOFTWARE
HOH A:4900 , HOH A:4901 , GLU G:783 , ASP G:791 , GLU G:892 , LEU G:907 , TYR G:1040 , ASP G:1041 , THR G:1042
BINDING SITE FOR RESIDUE ORN A 4072
71
HC8
SOFTWARE
ARG E:129 , ILE E:167 , ARG E:169 , THR E:173 , MET E:174 , GLY E:175 , GLY E:176 , GLU E:208 , LEU E:210 , ILE E:211 , GLU E:215 , MET E:240 , GLY E:241 , ILE E:242 , HIS E:243 , THR E:244 , GLN E:285 , ILE E:298 , GLU E:299 , THR E:376 , MN E:4042 , MN E:4043 , PO4 E:4046 , HOH E:4136 , HOH E:4140 , HOH E:4143 , HOH E:4577
BINDING SITE FOR RESIDUE ADP E 4041
72
HC9
SOFTWARE
PRO E:690 , ARG E:715 , MET E:725 , HIS E:754 , PHE E:755 , LEU E:756 , GLU E:761 , ALA E:785 , GLY E:786 , VAL E:787 , HIS E:788 , SER E:789 , GLN E:829 , GLU E:841 , MN E:4048 , K E:4049 , HOH E:4152 , HOH E:4153 , HOH E:4578
BINDING SITE FOR RESIDUE ADP E 4047
73
IC1
SOFTWARE
THR E:94 , CL E:4053
BINDING SITE FOR RESIDUE NET E 4052
74
IC2
SOFTWARE
ARG G:129 , ILE G:167 , ARG G:169 , THR G:173 , MET G:174 , GLY G:175 , GLY G:176 , GLU G:208 , LEU G:210 , ILE G:211 , GLU G:215 , MET G:240 , GLY G:241 , ILE G:242 , HIS G:243 , THR G:244 , GLN G:285 , ILE G:298 , GLU G:299 , THR G:376 , MN G:4063 , MN G:4064 , PO4 G:4067 , HOH G:4145 , HOH G:4149 , HOH G:4540
BINDING SITE FOR RESIDUE ADP G 4062
75
IC3
SOFTWARE
PRO G:690 , ARG G:715 , MET G:725 , HIS G:754 , PHE G:755 , LEU G:756 , GLU G:761 , ALA G:785 , GLY G:786 , VAL G:787 , HIS G:788 , SER G:789 , GLN G:829 , GLU G:841 , MN G:4069 , K G:4070
BINDING SITE FOR RESIDUE ADP G 4068
76
IC4
SOFTWARE
GLN G:22 , THR G:94 , ASN G:97 , HOH G:4130
BINDING SITE FOR RESIDUE NET G 4073
77
IC5
SOFTWARE
ARG A:129 , ILE A:167 , ARG A:169 , MET A:174 , GLY A:175 , GLY A:176 , ASP A:207 , GLU A:208 , LEU A:210 , ILE A:211 , GLU A:215 , MET A:240 , GLY A:241 , ILE A:242 , HIS A:243 , THR A:244 , GLN A:285 , ILE A:298 , GLU A:299 , THR A:376 , MN A:4001 , MN A:4002 , PO4 A:4005 , HOH A:4132 , HOH A:4136 , HOH A:4139 , HOH A:4579
BINDING SITE FOR RESIDUE ADP A 4000
78
IC6
SOFTWARE
PRO A:690 , ARG A:715 , MET A:725 , HIS A:754 , PHE A:755 , LEU A:756 , GLU A:761 , ALA A:785 , GLY A:786 , VAL A:787 , HIS A:788 , SER A:789 , GLN A:829 , GLU A:841 , MN A:4007 , K A:4008 , HOH A:4148 , HOH A:4150 , HOH A:4580 , HOH A:4850
BINDING SITE FOR RESIDUE ADP A 4006
79
IC7
SOFTWARE
GLN A:22 , THR A:94
BINDING SITE FOR RESIDUE NET A 4011
80
IC8
SOFTWARE
ARG C:129 , ILE C:167 , ARG C:169 , THR C:173 , MET C:174 , GLY C:175 , GLY C:176 , GLU C:208 , LEU C:210 , ILE C:211 , GLU C:215 , MET C:240 , GLY C:241 , ILE C:242 , HIS C:243 , THR C:244 , GLN C:285 , ILE C:298 , GLU C:299 , THR C:376 , MN C:4021 , MN C:4022 , PO4 C:4025 , HOH C:4097 , HOH C:4101 , HOH C:4104 , HOH C:4527
BINDING SITE FOR RESIDUE ADP C 4020
81
IC9
SOFTWARE
PRO C:690 , ARG C:715 , MET C:725 , HIS C:754 , PHE C:755 , LEU C:756 , GLU C:761 , ALA C:785 , GLY C:786 , VAL C:787 , HIS C:788 , SER C:789 , GLN C:829 , GLU C:841 , MN C:4027 , K C:4028 , HOH C:4113 , HOH C:4114 , HOH C:4531
BINDING SITE FOR RESIDUE ADP C 4026
82
JC1
SOFTWARE
GLN C:22 , THR C:94 , ASN C:97 , ASN C:936
BINDING SITE FOR RESIDUE NET C 4031
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 16)
Info
All PROSITE Patterns/Profiles
1: CPSASE_1 (A:164-178,C:164-178,E:164-178,A:71...)
2: CPSASE_2 (A:297-304,C:297-304,E:297-304,A:83...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CPSASE_1
PS00866
Carbamoyl-phosphate synthase subdomain signature 1.
CARB_ECOLI
164-178
710-724
8
A:164-178
C:164-178
E:164-178
G:164-178
A:710-724
C:710-724
E:710-724
G:710-724
2
CPSASE_2
PS00867
Carbamoyl-phosphate synthase subdomain signature 2.
CARB_ECOLI
297-304
839-846
8
A:297-304
C:297-304
E:297-304
G:297-304
A:839-846
C:839-846
E:839-846
G:839-846
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(6, 32)
Info
All SCOP Domains
1a: SCOP_d1c30a1 (A:403-555)
1b: SCOP_d1c30c1 (C:403-555)
1c: SCOP_d1c30e1 (E:403-555)
1d: SCOP_d1c30g1 (G:403-555)
2a: SCOP_d1c30a5 (A:128-402)
2b: SCOP_d1c30c5 (C:128-402)
2c: SCOP_d1c30c6 (C:677-935)
2d: SCOP_d1c30e5 (E:128-402)
2e: SCOP_d1c30e6 (E:677-935)
2f: SCOP_d1c30g5 (G:128-402)
2g: SCOP_d1c30g6 (G:677-935)
2h: SCOP_d1c30a6 (A:677-935)
3a: SCOP_d1c30b2 (B:153-380)
3b: SCOP_d1c30d2 (D:153-380)
3c: SCOP_d1c30f2 (F:153-380)
3d: SCOP_d1c30h2 (H:153-380)
4a: SCOP_d1c30a2 (A:936-1073)
4b: SCOP_d1c30c2 (C:936-1073)
4c: SCOP_d1c30e2 (E:936-1073)
4d: SCOP_d1c30g2 (G:936-1073)
5a: SCOP_d1c30a3 (A:1-127)
5b: SCOP_d1c30c3 (C:1-127)
5c: SCOP_d1c30c4 (C:556-676)
5d: SCOP_d1c30e3 (E:1-127)
5e: SCOP_d1c30e4 (E:556-676)
5f: SCOP_d1c30g3 (G:1-127)
5g: SCOP_d1c30g4 (G:556-676)
5h: SCOP_d1c30a4 (A:556-676)
6a: SCOP_d1c30b1 (B:2-152)
6b: SCOP_d1c30d1 (D:2-152)
6c: SCOP_d1c30f1 (F:2-152)
6d: SCOP_d1c30h1 (H:2-152)
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(
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(
)
Families
(
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Carbamoyl phosphate synthetase, large subunit connection domain
(10)
Superfamily
:
Carbamoyl phosphate synthetase, large subunit connection domain
(10)
Family
:
Carbamoyl phosphate synthetase, large subunit connection domain
(10)
Protein domain
:
Carbamoyl phosphate synthetase, large subunit connection domain
(10)
Escherichia coli [TaxId: 562]
(10)
1a
d1c30a1
A:403-555
1b
d1c30c1
C:403-555
1c
d1c30e1
E:403-555
1d
d1c30g1
G:403-555
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
ATP-grasp
(191)
Superfamily
:
Glutathione synthetase ATP-binding domain-like
(158)
Family
:
BC ATP-binding domain-like
(53)
Protein domain
:
Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains
(10)
Escherichia coli [TaxId: 562]
(10)
2a
d1c30a5
A:128-402
2b
d1c30c5
C:128-402
2c
d1c30c6
C:677-935
2d
d1c30e5
E:128-402
2e
d1c30e6
E:677-935
2f
d1c30g5
G:128-402
2g
d1c30g6
G:677-935
2h
d1c30a6
A:677-935
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Flavodoxin-like
(1057)
Superfamily
:
Class I glutamine amidotransferase-like
(173)
Family
:
Class I glutamine amidotransferases (GAT)
(48)
Protein domain
:
Carbamoyl phosphate synthetase, small subunit C-terminal domain
(10)
Escherichia coli [TaxId: 562]
(10)
3a
d1c30b2
B:153-380
3b
d1c30d2
D:153-380
3c
d1c30f2
F:153-380
3d
d1c30h2
H:153-380
Fold
:
Methylglyoxal synthase-like
(31)
Superfamily
:
Methylglyoxal synthase-like
(31)
Family
:
Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
(10)
Protein domain
:
Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
(10)
Escherichia coli [TaxId: 562]
(10)
4a
d1c30a2
A:936-1073
4b
d1c30c2
C:936-1073
4c
d1c30e2
E:936-1073
4d
d1c30g2
G:936-1073
Fold
:
PreATP-grasp domain
(131)
Superfamily
:
PreATP-grasp domain
(131)
Family
:
BC N-terminal domain-like
(50)
Protein domain
:
Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
(10)
Escherichia coli [TaxId: 562]
(10)
5a
d1c30a3
A:1-127
5b
d1c30c3
C:1-127
5c
d1c30c4
C:556-676
5d
d1c30e3
E:1-127
5e
d1c30e4
E:556-676
5f
d1c30g3
G:1-127
5g
d1c30g4
G:556-676
5h
d1c30a4
A:556-676
Fold
:
The swivelling beta/beta/alpha domain
(136)
Superfamily
:
Carbamoyl phosphate synthetase, small subunit N-terminal domain
(10)
Family
:
Carbamoyl phosphate synthetase, small subunit N-terminal domain
(10)
Protein domain
:
Carbamoyl phosphate synthetase, small subunit N-terminal domain
(10)
Escherichia coli [TaxId: 562]
(10)
6a
d1c30b1
B:2-152
6b
d1c30d1
D:2-152
6c
d1c30f1
F:2-152
6d
d1c30h1
H:2-152
[
close SCOP info
]
CATH Domains
(7, 40)
Info
all CATH domains
1a: CATH_1c30A06 (A:664-686,A:757-936)
1b: CATH_1c30E06 (E:664-686,E:757-936)
1c: CATH_1c30G06 (G:664-686,G:757-936)
1d: CATH_1c30A02 (A:117-140,A:211-403)
1e: CATH_1c30C02 (C:117-140,C:211-403)
1f: CATH_1c30E02 (E:117-140,E:211-403)
1g: CATH_1c30G02 (G:117-140,G:211-403)
1h: CATH_1c30C06 (C:664-686,C:757-936)
2a: CATH_1c30A03 (A:141-210)
2b: CATH_1c30E03 (E:141-210)
2c: CATH_1c30G03 (G:141-210)
2d: CATH_1c30A07 (A:687-756)
2e: CATH_1c30C07 (C:687-756)
2f: CATH_1c30E07 (E:687-756)
2g: CATH_1c30G07 (G:687-756)
2h: CATH_1c30C03 (C:141-210)
3a: CATH_1c30A08 (A:937-1073)
3b: CATH_1c30C08 (C:937-1042)
3c: CATH_1c30E08 (E:937-1042)
3d: CATH_1c30G08 (G:937-1042)
4a: CATH_1c30A05 (A:554-663)
4b: CATH_1c30E05 (E:554-663)
4c: CATH_1c30G05 (G:554-663)
4d: CATH_1c30A01 (A:1-116)
4e: CATH_1c30C01 (C:1-116)
4f: CATH_1c30E01 (E:1-116)
4g: CATH_1c30G01 (G:1-116)
4h: CATH_1c30C05 (C:554-663)
5a: CATH_1c30B02 (B:152-380)
5b: CATH_1c30F02 (F:152-380)
5c: CATH_1c30H02 (H:152-380)
5d: CATH_1c30D02 (D:152-380)
6a: CATH_1c30B01 (B:2-151)
6b: CATH_1c30D01 (D:2-151)
6c: CATH_1c30F01 (F:2-151)
6d: CATH_1c30H01 (H:2-151)
7a: CATH_1c30A04 (A:404-553)
7b: CATH_1c30C04 (C:404-553)
7c: CATH_1c30E04 (E:404-553)
7d: CATH_1c30G04 (G:404-553)
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(
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(
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Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
D-amino Acid Aminotransferase; Chain A, domain 1
(175)
Homologous Superfamily
:
ATP-grasp fold, B domain
(118)
Escherichia coli. Organism_taxid: 562.
(16)
1a
1c30A06
A:664-686,A:757-936
1b
1c30E06
E:664-686,E:757-936
1c
1c30G06
G:664-686,G:757-936
1d
1c30A02
A:117-140,A:211-403
1e
1c30C02
C:117-140,C:211-403
1f
1c30E02
E:117-140,E:211-403
1g
1c30G02
G:117-140,G:211-403
1h
1c30C06
C:664-686,C:757-936
Topology
:
Dna Ligase; domain 1
(375)
Homologous Superfamily
:
ATP-grasp fold, A domain
(109)
Escherichia coli. Organism_taxid: 562.
(21)
2a
1c30A03
A:141-210
2b
1c30E03
E:141-210
2c
1c30G03
G:141-210
2d
1c30A07
A:687-756
2e
1c30C07
C:687-756
2f
1c30E07
E:687-756
2g
1c30G07
G:687-756
2h
1c30C03
C:141-210
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1380, no name defined]
(29)
Escherichia coli. Organism_taxid: 562.
(7)
3a
1c30A08
A:937-1073
3b
1c30C08
C:937-1042
3c
1c30E08
E:937-1042
3d
1c30G08
G:937-1042
Homologous Superfamily
:
[code=3.40.50.20, no name defined]
(85)
Escherichia coli. Organism_taxid: 562.
(17)
4a
1c30A05
A:554-663
4b
1c30E05
E:554-663
4c
1c30G05
G:554-663
4d
1c30A01
A:1-116
4e
1c30C01
C:1-116
4f
1c30E01
E:1-116
4g
1c30G01
G:1-116
4h
1c30C05
C:554-663
Homologous Superfamily
:
[code=3.40.50.880, no name defined]
(97)
Escherichia coli. Organism_taxid: 562.
(8)
5a
1c30B02
B:152-380
5b
1c30F02
F:152-380
5c
1c30H02
H:152-380
5d
1c30D02
D:152-380
Architecture
:
3-Layer(bba) Sandwich
(528)
Topology
:
Glucose Oxidase; domain 1
(52)
Homologous Superfamily
:
[code=3.50.30.20, no name defined]
(10)
Escherichia coli. Organism_taxid: 562.
(6)
6a
1c30B01
B:2-151
6b
1c30D01
D:2-151
6c
1c30F01
F:2-151
6d
1c30H01
H:2-151
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Carbamoyl Phosphate Synthetase; Chain A, domain 4
(10)
Homologous Superfamily
:
Carbamoyl Phosphate Synthetase; Chain A, domain 4
(10)
Escherichia coli. Organism_taxid: 562.
(6)
7a
1c30A04
A:404-553
7b
1c30C04
C:404-553
7c
1c30E04
E:404-553
7d
1c30G04
G:404-553
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Pfam Domains
(0, 0)
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