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1BYG
Asym. Unit
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Asym.Unit (50 KB)
Biol.Unit 1 (45 KB)
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(1)
Title
:
KINASE DOMAIN OF HUMAN C-TERMINAL SRC KINASE (CSK) IN COMPLEX WITH INHIBITOR STAUROSPORINE
Authors
:
A. A. Antson, M. B. A. C. Lamers, R. K. Scott, D. H. Williams, R. E. Hubbard
Date
:
14 Oct 98 (Deposition) - 14 Oct 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Protein Kinase, C-Terminal Src Kinase, Phosphorylation, Staurosporine, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. B. Lamers, A. A. Antson, R. E. Hubbard, R. K. Scott, D. H. Williams
Structure Of The Protein Tyrosine Kinase Domain Of C-Terminal Src Kinase (Csk) In Complex With Staurosporine.
J. Mol. Biol. V. 285 713 1999
(for further references see the
PDB file header
)
[
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: STAUROSPORINE (STUa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
STU
1
Ligand/Ion
STAUROSPORINE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ILE A:201 , GLY A:202 , ALA A:220 , THR A:266 , GLU A:267 , TYR A:268 , MET A:269 , GLY A:272 , SER A:273 , ARG A:318 , ASN A:319 , LEU A:321
BINDING SITE FOR RESIDUE STU A 501
[
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_025203 (G287D, chain A, )
2: VAR_025204 (R398Q, chain A, )
3: VAR_025205 (H442R, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_025203
G
287
D
CSK_HUMAN
Polymorphism
34866753
A
G
287
D
2
UniProt
VAR_025204
R
398
Q
CSK_HUMAN
Polymorphism
34616395
A
R
398
Q
3
UniProt
VAR_025205
H
442
R
CSK_HUMAN
Polymorphism
35556162
A
H
442
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:201-222)
2: PROTEIN_KINASE_TYR (A:310-322)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
CSK_HUMAN
201-222
1
A:201-222
2
PROTEIN_KINASE_TYR
PS00109
Tyrosine protein kinases specific active-site signature.
CSK_HUMAN
310-322
1
A:310-322
[
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Exons
(7, 7)
Info
All Exons
Exon 1.7 (A:187-208)
Exon 1.8 (A:208-241 (gaps))
Exon 1.9 (A:241-271 (gaps))
Exon 1.10 (A:272-296)
Exon 1.11 (A:296-361 (gaps))
Exon 1.12 (A:362-390)
Exon 1.13b (A:391-448)
View:
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All Exon Boundaries
1: Boundary 1.6/1.7
2: Boundary 1.7/1.8
3: Boundary 1.8/1.9
4: Boundary 1.9/1.10
5: Boundary 1.10/1.11
6: Boundary 1.11/1.12
7: Boundary 1.12/1.13b
8: Boundary 1.13b/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000220003
1b
ENSE00001357268
chr15:
75074425-75075061
637
CSK_HUMAN
-
0
0
-
-
1.2
ENST00000220003
2
ENSE00001357265
chr15:
75090574-75090653
80
CSK_HUMAN
1-5
5
0
-
-
1.3
ENST00000220003
3
ENSE00001326572
chr15:
75090956-75091069
114
CSK_HUMAN
6-43
38
0
-
-
1.4
ENST00000220003
4
ENSE00001245986
chr15:
75091167-75091279
113
CSK_HUMAN
44-81
38
0
-
-
1.5b
ENST00000220003
5b
ENSE00001245980
chr15:
75091613-75091832
220
CSK_HUMAN
81-154
74
0
-
-
1.6
ENST00000220003
6
ENSE00001245972
chr15:
75092753-75092846
94
CSK_HUMAN
155-186
32
0
-
-
1.7
ENST00000220003
7
ENSE00001245968
chr15:
75093022-75093087
66
CSK_HUMAN
186-208
23
1
A:187-208
22
1.8
ENST00000220003
8
ENSE00001245963
chr15:
75093164-75093263
100
CSK_HUMAN
208-241
34
1
A:208-241 (gaps)
34
1.9
ENST00000220003
9
ENSE00001245953
chr15:
75093353-75093443
91
CSK_HUMAN
241-271
31
1
A:241-271 (gaps)
31
1.10
ENST00000220003
10
ENSE00001245942
chr15:
75093863-75093936
74
CSK_HUMAN
272-296
25
1
A:272-296
25
1.11
ENST00000220003
11
ENSE00001163016
chr15:
75094036-75094231
196
CSK_HUMAN
296-361
66
1
A:296-361 (gaps)
66
1.12
ENST00000220003
12
ENSE00001245924
chr15:
75094338-75094424
87
CSK_HUMAN
362-390
29
1
A:362-390
29
1.13b
ENST00000220003
13b
ENSE00001870511
chr15:
75094672-75095539
868
CSK_HUMAN
391-450
60
1
A:391-448
58
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1byga_ (A:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
Carboxyl-terminal src kinase (csk)
(4)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d1byga_
A:
[
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1bygA01 (A:187-268)
2a: CATH_1bygA02 (A:269-445)
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(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
1bygA01
A:187-268
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
1bygA02
A:269-445
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain A
Asymmetric Unit 1
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