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1BYE
Biol. Unit 2
Info
Asym.Unit (148 KB)
Biol.Unit 1 (71 KB)
Biol.Unit 2 (71 KB)
Biol.Unit 3 (276 KB)
Biol.Unit 4 (140 KB)
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(1)
Title
:
GLUTATHIONE S-TRANSFERASE I FROM MAIS IN COMPLEX WITH ATRAZINE GLUTATHIONE CONJUGATE
Authors
:
L. Prade, R. Huber, B. Bieseler
Date
:
14 Oct 98 (Deposition) - 21 Oct 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: A,B,C,D (2x)
Biol. Unit 4: A,B,C,D (1x)
Keywords
:
Glutathione S-Transferase, Herbicide
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Prade, R. Huber, B. Bieseler
Structures Of Herbicides In Complex With Their Detoxifying Enzyme Glutathione S-Transferase - Explanations For The Selectivity Of The Enzyme In Plants.
Structure V. 6 1445 1998
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: ATRAZINE GLUTATHIONE CONJUGATE (ATAa)
1b: ATRAZINE GLUTATHIONE CONJUGATE (ATAb)
1c: ATRAZINE GLUTATHIONE CONJUGATE (ATAc)
1d: ATRAZINE GLUTATHIONE CONJUGATE (ATAd)
View:
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No.
Name
Count
Type
Full Name
1
ATA
2
Ligand/Ion
ATRAZINE GLUTATHIONE CONJUGATE
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Sites
(3, 3)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC3 (SOFTWARE)
3: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
HOH A:1005 , MET B:10 , SER B:11 , ASN B:13 , PHE B:35 , LYS B:41 , GLY B:52 , GLN B:53 , VAL B:54 , GLU B:66 , SER B:67 , ILE B:118 , MET D:121 , LEU D:122 , GLY D:123
BINDING SITE FOR RESIDUE ATA B 1002
2
AC3
SOFTWARE
SER C:11 , ASN C:13 , PHE C:35 , GLN C:53 , VAL C:54 , PRO C:55 , GLU C:66 , SER C:67 , ILE C:118 , HOH C:1017
BINDING SITE FOR RESIDUE ATA C 1003
3
AC4
SOFTWARE
MET B:121 , LEU B:122 , ASN C:103 , MET D:10 , SER D:11 , ASN D:13 , PHE D:35 , HIS D:40 , LYS D:41 , GLN D:53 , VAL D:54 , PRO D:55 , GLU D:66 , SER D:67 , ILE D:118 , HOH D:1006
BINDING SITE FOR RESIDUE ATA D 1004
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: GST_NTER (C:1-82,D:1-82)
2: GST_CTER (C:87-213,D:87-213)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GST_NTER
PS50404
Soluble glutathione S-transferase N-terminal domain profile.
GSTF1_MAIZE
2-83
2
-
-
C:1-82
D:1-82
2
GST_CTER
PS50405
Soluble glutathione S-transferase C-terminal domain profile.
GSTF1_MAIZE
88-214
2
-
-
C:87-213
D:87-213
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 8)
Info
All SCOP Domains
1a: SCOP_d1byea1 (A:81-213)
1b: SCOP_d1byeb1 (B:81-213)
1c: SCOP_d1byec1 (C:81-213)
1d: SCOP_d1byed1 (D:81-213)
2a: SCOP_d1byea2 (A:1-80)
2b: SCOP_d1byeb2 (B:1-80)
2c: SCOP_d1byec2 (C:1-80)
2d: SCOP_d1byed2 (D:1-80)
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)
Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
GST C-terminal domain-like
(353)
Superfamily
:
GST C-terminal domain-like
(353)
Family
:
Glutathione S-transferase (GST), C-terminal domain
(263)
Protein domain
:
Class phi GST
(5)
Maize (Zea mays), type I [TaxId: 4577]
(2)
1a
d1byea1
A:81-213
1b
d1byeb1
B:81-213
1c
d1byec1
C:81-213
1d
d1byed1
D:81-213
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Glutathione S-transferase (GST), N-terminal domain
(216)
Protein domain
:
Class phi GST
(5)
Maize (Zea mays), type I [TaxId: 4577]
(2)
2a
d1byea2
A:1-80
2b
d1byeb2
B:1-80
2c
d1byec2
C:1-80
2d
d1byed2
D:1-80
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CATH Domains
(2, 8)
Info
all CATH domains
1a: CATH_1byeA01 (A:2-83)
1b: CATH_1byeB01 (B:2-83)
1c: CATH_1byeC01 (C:2-83)
1d: CATH_1byeD01 (D:2-83)
2a: CATH_1byeA02 (A:84-206)
2b: CATH_1byeB02 (B:84-206)
2c: CATH_1byeC02 (C:84-206)
2d: CATH_1byeD02 (D:84-206)
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(
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
Zea mays. Organism_taxid: 4577.
(1)
1a
1byeA01
A:2-83
1b
1byeB01
B:2-83
1c
1byeC01
C:2-83
1d
1byeD01
D:2-83
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2
(267)
Homologous Superfamily
:
[code=1.20.1050.10, no name defined]
(249)
Zea mays. Organism_taxid: 4577.
(1)
2a
1byeA02
A:84-206
2b
1byeB02
B:84-206
2c
1byeC02
C:84-206
2d
1byeD02
D:84-206
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (148 KB)
Header - Asym.Unit
Biol.Unit 1 (71 KB)
Header - Biol.Unit 1
Biol.Unit 2 (71 KB)
Header - Biol.Unit 2
Biol.Unit 3 (276 KB)
Header - Biol.Unit 3
Biol.Unit 4 (140 KB)
Header - Biol.Unit 4
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