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1BYE
Biol. Unit 1
Info
Asym.Unit (148 KB)
Biol.Unit 1 (71 KB)
Biol.Unit 2 (71 KB)
Biol.Unit 3 (276 KB)
Biol.Unit 4 (140 KB)
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(1)
Title
:
GLUTATHIONE S-TRANSFERASE I FROM MAIS IN COMPLEX WITH ATRAZINE GLUTATHIONE CONJUGATE
Authors
:
L. Prade, R. Huber, B. Bieseler
Date
:
14 Oct 98 (Deposition) - 21 Oct 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: A,B,C,D (2x)
Biol. Unit 4: A,B,C,D (1x)
Keywords
:
Glutathione S-Transferase, Herbicide
(Keyword Search:
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]
)
Reference
:
L. Prade, R. Huber, B. Bieseler
Structures Of Herbicides In Complex With Their Detoxifying Enzyme Glutathione S-Transferase - Explanations For The Selectivity Of The Enzyme In Plants.
Structure V. 6 1445 1998
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: ATRAZINE GLUTATHIONE CONJUGATE (ATAa)
1b: ATRAZINE GLUTATHIONE CONJUGATE (ATAb)
1c: ATRAZINE GLUTATHIONE CONJUGATE (ATAc)
1d: ATRAZINE GLUTATHIONE CONJUGATE (ATAd)
View:
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No.
Name
Count
Type
Full Name
1
ATA
2
Ligand/Ion
ATRAZINE GLUTATHIONE CONJUGATE
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
MET A:10 , SER A:11 , TRP A:12 , ASN A:13 , ASN A:34 , PHE A:35 , ALA A:36 , HIS A:40 , GLY A:52 , GLN A:53 , VAL A:54 , PRO A:55 , GLU A:66 , SER A:67 , ILE A:118 , MET A:121 , HOH A:1002
BINDING SITE FOR RESIDUE ATA A 1001
2
AC2
SOFTWARE
HOH A:1005 , MET B:10 , SER B:11 , ASN B:13 , PHE B:35 , LYS B:41 , GLY B:52 , GLN B:53 , VAL B:54 , GLU B:66 , SER B:67 , ILE B:118 , MET D:121 , LEU D:122 , GLY D:123
BINDING SITE FOR RESIDUE ATA B 1002
3
AC4
SOFTWARE
MET B:121 , LEU B:122 , ASN C:103 , MET D:10 , SER D:11 , ASN D:13 , PHE D:35 , HIS D:40 , LYS D:41 , GLN D:53 , VAL D:54 , PRO D:55 , GLU D:66 , SER D:67 , ILE D:118 , HOH D:1006
BINDING SITE FOR RESIDUE ATA D 1004
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: GST_NTER (A:1-82,B:1-82)
2: GST_CTER (A:87-213,B:87-213)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GST_NTER
PS50404
Soluble glutathione S-transferase N-terminal domain profile.
GSTF1_MAIZE
2-83
2
A:1-82
B:1-82
-
-
2
GST_CTER
PS50405
Soluble glutathione S-transferase C-terminal domain profile.
GSTF1_MAIZE
88-214
2
A:87-213
B:87-213
-
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 8)
Info
All SCOP Domains
1a: SCOP_d1byea1 (A:81-213)
1b: SCOP_d1byeb1 (B:81-213)
1c: SCOP_d1byec1 (C:81-213)
1d: SCOP_d1byed1 (D:81-213)
2a: SCOP_d1byea2 (A:1-80)
2b: SCOP_d1byeb2 (B:1-80)
2c: SCOP_d1byec2 (C:1-80)
2d: SCOP_d1byed2 (D:1-80)
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)
Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
GST C-terminal domain-like
(353)
Superfamily
:
GST C-terminal domain-like
(353)
Family
:
Glutathione S-transferase (GST), C-terminal domain
(263)
Protein domain
:
Class phi GST
(5)
Maize (Zea mays), type I [TaxId: 4577]
(2)
1a
d1byea1
A:81-213
1b
d1byeb1
B:81-213
1c
d1byec1
C:81-213
1d
d1byed1
D:81-213
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Glutathione S-transferase (GST), N-terminal domain
(216)
Protein domain
:
Class phi GST
(5)
Maize (Zea mays), type I [TaxId: 4577]
(2)
2a
d1byea2
A:1-80
2b
d1byeb2
B:1-80
2c
d1byec2
C:1-80
2d
d1byed2
D:1-80
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CATH Domains
(2, 8)
Info
all CATH domains
1a: CATH_1byeA01 (A:2-83)
1b: CATH_1byeB01 (B:2-83)
1c: CATH_1byeC01 (C:2-83)
1d: CATH_1byeD01 (D:2-83)
2a: CATH_1byeA02 (A:84-206)
2b: CATH_1byeB02 (B:84-206)
2c: CATH_1byeC02 (C:84-206)
2d: CATH_1byeD02 (D:84-206)
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(
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
Zea mays. Organism_taxid: 4577.
(1)
1a
1byeA01
A:2-83
1b
1byeB01
B:2-83
1c
1byeC01
C:2-83
1d
1byeD01
D:2-83
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2
(267)
Homologous Superfamily
:
[code=1.20.1050.10, no name defined]
(249)
Zea mays. Organism_taxid: 4577.
(1)
2a
1byeA02
A:84-206
2b
1byeB02
B:84-206
2c
1byeC02
C:84-206
2d
1byeD02
D:84-206
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (148 KB)
Header - Asym.Unit
Biol.Unit 1 (71 KB)
Header - Biol.Unit 1
Biol.Unit 2 (71 KB)
Header - Biol.Unit 2
Biol.Unit 3 (276 KB)
Header - Biol.Unit 3
Biol.Unit 4 (140 KB)
Header - Biol.Unit 4
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