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1BVU
Asym. Unit
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Asym.Unit (398 KB)
Biol.Unit 1 (393 KB)
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(1)
Title
:
GLUTAMATE DEHYDROGENASE FROM THERMOCOCCUS LITORALIS
Authors
:
P. J. Baker, K. L. Britton, K. S. Yip, T. J. Stillman, D. W. Rice
Date
:
20 Jul 99 (Deposition) - 18 Sep 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Oxidoreductase, Thermal Stability
(Keyword Search:
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Reference
:
K. L. Britton, K. S. Yip, S. E. Sedelnikova, T. J. Stillman, M. W. Adams, K. Ma, D. L. Maeder, F. T. Robb, N. Tolliday, C. Vetriani, D. W. Rice, P. J. Baker
Structure Determination Of The Glutamate Dehydrogenase From The Hyperthermophile Thermococcus Litoralis And Its Comparison With That From Pyrococcus Furiosus
J. Mol. Biol. V. 293 1121 1999
(for further references see the
PDB file header
)
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Hetero Components
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Sites
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PROSITE Patterns/Profiles
(1, 6)
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1: GLFV_DEHYDROGENASE (A:98-111,B:98-111,C:98-111,D:98-11...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GLFV_DEHYDROGENASE
PS00074
Glu / Leu / Phe / Val dehydrogenases active site.
DHE3_THELN
99-112
6
A:98-111
B:98-111
C:98-111
D:98-111
E:98-111
F:98-111
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d1bvua2 (A:3-180)
1b: SCOP_d1bvub2 (B:3-180)
1c: SCOP_d1bvuc2 (C:3-180)
1d: SCOP_d1bvud2 (D:3-180)
1e: SCOP_d1bvue2 (E:3-180)
1f: SCOP_d1bvuf2 (F:3-180)
2a: SCOP_d1bvua1 (A:181-418)
2b: SCOP_d1bvub1 (B:181-418)
2c: SCOP_d1bvuc1 (C:181-418)
2d: SCOP_d1bvud1 (D:181-418)
2e: SCOP_d1bvue1 (E:181-418)
2f: SCOP_d1bvuf1 (F:181-418)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Aminoacid dehydrogenase-like, N-terminal domain
(100)
Superfamily
:
Aminoacid dehydrogenase-like, N-terminal domain
(100)
Family
:
Aminoacid dehydrogenases
(28)
Protein domain
:
Glutamate dehydrogenase
(19)
Thermococcus litoralis [TaxId: 2265]
(1)
1a
d1bvua2
A:3-180
1b
d1bvub2
B:3-180
1c
d1bvuc2
C:3-180
1d
d1bvud2
D:3-180
1e
d1bvue2
E:3-180
1f
d1bvuf2
F:3-180
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Aminoacid dehydrogenase-like, C-terminal domain
(67)
Protein domain
:
Glutamate dehydrogenase
(19)
Thermococcus litoralis [TaxId: 2265]
(1)
2a
d1bvua1
A:181-418
2b
d1bvub1
B:181-418
2c
d1bvuc1
C:181-418
2d
d1bvud1
D:181-418
2e
d1bvue1
E:181-418
2f
d1bvuf1
F:181-418
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CATH Domains
(2, 12)
Info
all CATH domains
1a: CATH_1bvuA01 (A:35-180)
1b: CATH_1bvuB01 (B:35-180)
1c: CATH_1bvuC01 (C:35-180)
1d: CATH_1bvuD01 (D:35-180)
1e: CATH_1bvuE01 (E:35-180)
1f: CATH_1bvuF01 (F:35-180)
2a: CATH_1bvuA02 (A:181-417)
2b: CATH_1bvuB02 (B:181-417)
2c: CATH_1bvuC02 (C:181-417)
2d: CATH_1bvuD02 (D:181-417)
2e: CATH_1bvuE02 (E:181-417)
2f: CATH_1bvuF02 (F:181-417)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Leucine Dehydrogenase; Chain A, domain 1
(52)
Homologous Superfamily
:
Leucine Dehydrogenase, chain A, domain 1
(52)
Thermococcus litoralis. Organism_taxid: 2265
(1)
1a
1bvuA01
A:35-180
1b
1bvuB01
B:35-180
1c
1bvuC01
C:35-180
1d
1bvuD01
D:35-180
1e
1bvuE01
E:35-180
1f
1bvuF01
F:35-180
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
NAD(P)-binding Rossmann-like Domain
(1244)
Thermococcus litoralis. Organism_taxid: 2265
(1)
2a
1bvuA02
A:181-417
2b
1bvuB02
B:181-417
2c
1bvuC02
C:181-417
2d
1bvuD02
D:181-417
2e
1bvuE02
E:181-417
2f
1bvuF02
F:181-417
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Pfam Domains
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