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Asym. Unit
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Asym.Unit (39 KB)
Biol.Unit 1 (35 KB)
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(1)
Title
:
ACUTOLYSIN A FROM SNAKE VENOM OF AGKISTRODON ACUTUS AT PH 5.0
Authors
:
W. Gong, X. Zhu, S. Liu, M. Teng, L. Niu
Date
:
03 Sep 98 (Deposition) - 07 Sep 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Metalloproteinase, Snake Venom, Mmp, Toxin
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
W. Gong, X. Zhu, S. Liu, M. Teng, L. Niu
Crystal Structures Of Acutolysin A, A Three-Disulfide Hemorrhagic Zinc Metalloproteinase From The Snake Venom Of Agkistrodon Acutus.
J. Mol. Biol. V. 283 657 1998
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
2a: ZINC ION (ZNa)
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No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
2
ZN
1
Ligand/Ion
ZINC ION
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Sites
(2, 2)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:142 , HIS A:146 , HIS A:152 , HOH A:561
BINDING SITE FOR RESIDUE ZN A 800
2
AC2
SOFTWARE
GLU A:9 , ASP A:93 , CYS A:197 , ASN A:200 , HOH A:562
BINDING SITE FOR RESIDUE CA A 900
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PROSITE Patterns/Profiles
(2, 2)
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1: ADAM_MEPRO (A:6-200)
2: ZINC_PROTEASE (A:139-148)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ADAM_MEPRO
PS50215
ADAM type metalloprotease domain profile.
VM1AA_DEIAC
193-390
1
A:6-200
2
ZINC_PROTEASE
PS00142
Neutral zinc metallopeptidases, zinc-binding region signature.
VM1AA_DEIAC
326-335
1
A:139-148
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
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1a: SCOP_d1buda_ (A:)
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)
Protein Domains
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Organisms
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)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Zincin-like
(701)
Superfamily
:
Metalloproteases (zincins), catalytic domain
(647)
Family
:
Reprolysin-like
(24)
Protein domain
:
Snake venom metalloprotease
(20)
Five-pace snake (Agkistrodon acutus), acutolysin A [TaxId: 36307]
(2)
1a
d1buda_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1budA00 (A:4-200)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Collagenase (Catalytic Domain)
(236)
Homologous Superfamily
:
Collagenase (Catalytic Domain)
(234)
Chinese moccasin (Deinagkistrodon acutus)
(4)
1a
1budA00
A:4-200
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Chain A
Asymmetric Unit 1
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