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1BSR
Biol. Unit 2
Info
Asym.Unit (47 KB)
Biol.Unit 1 (43 KB)
Biol.Unit 2 (83 KB)
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(1)
Title
:
BOVINE SEMINAL RIBONUCLEASE STRUCTURE AT 1.9 ANGSTROMS RESOLUTION
Authors
:
L. Mazzarella
Date
:
28 Apr 93 (Deposition) - 31 Oct 93 (Release) - 16 Nov 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A,B (2x)
Keywords
:
Hydrolase(Phosphoric Diester, Rna)
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Mazzarella, S. Capasso, D. Demasi, G. Di Lorenzo, C. A. Mattia, A. Zagari
Bovine Seminal Ribonuclease: Structure At 1. 9 A Resolution.
Acta Crystallogr. , Sect. D V. 49 389 1993
(for further references see the
PDB file header
)
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Hetero Components
(1, 14)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
1d: SULFATE ION (SO4d)
1e: SULFATE ION (SO4e)
1f: SULFATE ION (SO4f)
1g: SULFATE ION (SO4g)
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No.
Name
Count
Type
Full Name
1
SO4
14
Ligand/Ion
SULFATE ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AS1 (UNKNOWN)
9: AS2 (UNKNOWN)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:12 , LYS B:41 , HIS B:119 , PHE B:120 , HOH B:129 , HOH B:162
BINDING SITE FOR RESIDUE SO4 B 125
2
AC2
SOFTWARE
SER A:3 , ALA A:4 , LYS A:39 , LYS A:41 , PRO A:42 , HOH A:146
BINDING SITE FOR RESIDUE SO4 A 126
3
AC3
SOFTWARE
LYS A:7 , GLN A:11 , GLY A:112 , LYS A:113 , HOH A:133 , LYS B:39
BINDING SITE FOR RESIDUE SO4 A 127
4
AC4
SOFTWARE
SER A:18 , PRO A:19 , SER A:20 , SER A:21 , SER A:22 , GLN B:101
BINDING SITE FOR RESIDUE SO4 A 128
5
AC5
SOFTWARE
VAL A:118 , HIS A:119 , PHE A:120 , HOH A:183 , GLN B:11 , HIS B:12
BINDING SITE FOR RESIDUE SO4 A 125
6
AC6
SOFTWARE
SER B:3 , ALA B:4 , LYS B:39 , LYS B:41 , PRO B:42 , HOH B:148 , HOH B:174 , HOH B:177
BINDING SITE FOR RESIDUE SO4 B 126
7
AC7
SOFTWARE
LYS A:39 , LYS B:7 , GLN B:11 , GLY B:112 , LYS B:113 , HOH B:135
BINDING SITE FOR RESIDUE SO4 A 129
8
AS1
UNKNOWN
HIS B:12 , LYS A:41 , THR A:45 , HIS A:119 , PHE A:120 , ASP A:121
NULL
9
AS2
UNKNOWN
HIS A:12 , LYS B:41 , THR B:45 , HIS B:119 , PHE B:120 , ASP B:121
NULL
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: RNASE_PANCREATIC (A:40-46,B:40-46)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RNASE_PANCREATIC
PS00127
Pancreatic ribonuclease family signature.
RNS_BOVIN
66-72
4
A:40-46
B:40-46
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1bsra_ (A:)
1b: SCOP_d1bsrb_ (B:)
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)
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)
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)
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)
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
RNase A-like
(356)
Superfamily
:
RNase A-like
(356)
Family
:
Ribonuclease A-like
(347)
Protein domain
:
Seminal ribonucleasease
(17)
Cow (Bos taurus) [TaxId: 9913]
(17)
1a
d1bsra_
A:
1b
d1bsrb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1bsrA00 (A:1-124)
1b: CATH_1bsrB00 (B:1-124)
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)
Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
P-30 Protein
(299)
Homologous Superfamily
:
P-30 Protein
(299)
Cattle (Bos taurus)
(152)
1a
1bsrA00
A:1-124
1b
1bsrB00
B:1-124
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Pfam Domains
(0, 0)
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Asym.Unit (47 KB)
Header - Asym.Unit
Biol.Unit 1 (43 KB)
Header - Biol.Unit 1
Biol.Unit 2 (83 KB)
Header - Biol.Unit 2
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