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1BOS
Asym. Unit
Info
Asym.Unit (281 KB)
Biol.Unit 1 (74 KB)
Biol.Unit 2 (73 KB)
Biol.Unit 3 (74 KB)
Biol.Unit 4 (73 KB)
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(1)
Title
:
SHIGA-LIKE TOXIN COMPLEXED WITH ITS RECEPTOR
Authors
:
H. Ling, A. Boodhoo, B. Hazes, M. D. Cummings, G. D. Armstrong, J. L. Brunton, R. J. Read
Date
:
13 Jan 98 (Deposition) - 02 Feb 99 (Release) - 21 Jul 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T
Biol. Unit 1: A,B,C,D,E (1x)
Biol. Unit 2: F,G,H,I,J (1x)
Biol. Unit 3: K,L,M,N,O (1x)
Biol. Unit 4: P,Q,R,S,T (1x)
Keywords
:
Toxin, Receptor Binding, Protein-Carbohydrate Recognition, Ob-Fold
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Ling, A. Boodhoo, B. Hazes, M. D. Cummings, G. D. Armstrong, J. L. Brunton, R. J. Read
Structure Of The Shiga-Like Toxin I B-Pentamer Complexed With An Analogue Of Its Receptor Gb3.
Biochemistry V. 37 1777 1998
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(3, 142)
Info
All Hetero Components
1a: BETA-D-GLUCOSE (BGCa)
1aa: BETA-D-GLUCOSE (BGCaa)
1ab: BETA-D-GLUCOSE (BGCab)
1ac: BETA-D-GLUCOSE (BGCac)
1ad: BETA-D-GLUCOSE (BGCad)
1ae: BETA-D-GLUCOSE (BGCae)
1af: BETA-D-GLUCOSE (BGCaf)
1ag: BETA-D-GLUCOSE (BGCag)
1b: BETA-D-GLUCOSE (BGCb)
1c: BETA-D-GLUCOSE (BGCc)
1d: BETA-D-GLUCOSE (BGCd)
1e: BETA-D-GLUCOSE (BGCe)
1f: BETA-D-GLUCOSE (BGCf)
1g: BETA-D-GLUCOSE (BGCg)
1h: BETA-D-GLUCOSE (BGCh)
1i: BETA-D-GLUCOSE (BGCi)
1j: BETA-D-GLUCOSE (BGCj)
1k: BETA-D-GLUCOSE (BGCk)
1l: BETA-D-GLUCOSE (BGCl)
1m: BETA-D-GLUCOSE (BGCm)
1n: BETA-D-GLUCOSE (BGCn)
1o: BETA-D-GLUCOSE (BGCo)
1p: BETA-D-GLUCOSE (BGCp)
1q: BETA-D-GLUCOSE (BGCq)
1r: BETA-D-GLUCOSE (BGCr)
1s: BETA-D-GLUCOSE (BGCs)
1t: BETA-D-GLUCOSE (BGCt)
1u: BETA-D-GLUCOSE (BGCu)
1v: BETA-D-GLUCOSE (BGCv)
1w: BETA-D-GLUCOSE (BGCw)
1x: BETA-D-GLUCOSE (BGCx)
1y: BETA-D-GLUCOSE (BGCy)
1z: BETA-D-GLUCOSE (BGCz)
2a: BETA-D-GALACTOSE (GALa)
2aa: BETA-D-GALACTOSE (GALaa)
2ab: BETA-D-GALACTOSE (GALab)
2ac: BETA-D-GALACTOSE (GALac)
2ad: BETA-D-GALACTOSE (GALad)
2ae: BETA-D-GALACTOSE (GALae)
2af: BETA-D-GALACTOSE (GALaf)
2ag: BETA-D-GALACTOSE (GALag)
2ah: BETA-D-GALACTOSE (GALah)
2ai: BETA-D-GALACTOSE (GALai)
2aj: BETA-D-GALACTOSE (GALaj)
2ak: BETA-D-GALACTOSE (GALak)
2al: BETA-D-GALACTOSE (GALal)
2am: BETA-D-GALACTOSE (GALam)
2an: BETA-D-GALACTOSE (GALan)
2ao: BETA-D-GALACTOSE (GALao)
2ap: BETA-D-GALACTOSE (GALap)
2aq: BETA-D-GALACTOSE (GALaq)
2ar: BETA-D-GALACTOSE (GALar)
2as: BETA-D-GALACTOSE (GALas)
2at: BETA-D-GALACTOSE (GALat)
2au: BETA-D-GALACTOSE (GALau)
2av: BETA-D-GALACTOSE (GALav)
2aw: BETA-D-GALACTOSE (GALaw)
2ax: BETA-D-GALACTOSE (GALax)
2ay: BETA-D-GALACTOSE (GALay)
2az: BETA-D-GALACTOSE (GALaz)
2b: BETA-D-GALACTOSE (GALb)
2ba: BETA-D-GALACTOSE (GALba)
2bb: BETA-D-GALACTOSE (GALbb)
2bc: BETA-D-GALACTOSE (GALbc)
2bd: BETA-D-GALACTOSE (GALbd)
2be: BETA-D-GALACTOSE (GALbe)
2bf: BETA-D-GALACTOSE (GALbf)
2bg: BETA-D-GALACTOSE (GALbg)
2bh: BETA-D-GALACTOSE (GALbh)
2c: BETA-D-GALACTOSE (GALc)
2d: BETA-D-GALACTOSE (GALd)
2e: BETA-D-GALACTOSE (GALe)
2f: BETA-D-GALACTOSE (GALf)
2g: BETA-D-GALACTOSE (GALg)
2h: BETA-D-GALACTOSE (GALh)
2i: BETA-D-GALACTOSE (GALi)
2j: BETA-D-GALACTOSE (GALj)
2k: BETA-D-GALACTOSE (GALk)
2l: BETA-D-GALACTOSE (GALl)
2m: BETA-D-GALACTOSE (GALm)
2n: BETA-D-GALACTOSE (GALn)
2o: BETA-D-GALACTOSE (GALo)
2p: BETA-D-GALACTOSE (GALp)
2q: BETA-D-GALACTOSE (GALq)
2r: BETA-D-GALACTOSE (GALr)
2s: BETA-D-GALACTOSE (GALs)
2t: BETA-D-GALACTOSE (GALt)
2u: BETA-D-GALACTOSE (GALu)
2v: BETA-D-GALACTOSE (GALv)
2w: BETA-D-GALACTOSE (GALw)
2x: BETA-D-GALACTOSE (GALx)
2y: BETA-D-GALACTOSE (GALy)
2z: BETA-D-GALACTOSE (GALz)
3a: ALPHA D-GALACTOSE (GLAa)
3aa: ALPHA D-GALACTOSE (GLAaa)
3ab: ALPHA D-GALACTOSE (GLAab)
3ac: ALPHA D-GALACTOSE (GLAac)
3ad: ALPHA D-GALACTOSE (GLAad)
3ae: ALPHA D-GALACTOSE (GLAae)
3af: ALPHA D-GALACTOSE (GLAaf)
3ag: ALPHA D-GALACTOSE (GLAag)
3ah: ALPHA D-GALACTOSE (GLAah)
3ai: ALPHA D-GALACTOSE (GLAai)
3aj: ALPHA D-GALACTOSE (GLAaj)
3ak: ALPHA D-GALACTOSE (GLAak)
3al: ALPHA D-GALACTOSE (GLAal)
3am: ALPHA D-GALACTOSE (GLAam)
3an: ALPHA D-GALACTOSE (GLAan)
3ao: ALPHA D-GALACTOSE (GLAao)
3ap: ALPHA D-GALACTOSE (GLAap)
3aq: ALPHA D-GALACTOSE (GLAaq)
3ar: ALPHA D-GALACTOSE (GLAar)
3as: ALPHA D-GALACTOSE (GLAas)
3at: ALPHA D-GALACTOSE (GLAat)
3au: ALPHA D-GALACTOSE (GLAau)
3av: ALPHA D-GALACTOSE (GLAav)
3aw: ALPHA D-GALACTOSE (GLAaw)
3b: ALPHA D-GALACTOSE (GLAb)
3c: ALPHA D-GALACTOSE (GLAc)
3d: ALPHA D-GALACTOSE (GLAd)
3e: ALPHA D-GALACTOSE (GLAe)
3f: ALPHA D-GALACTOSE (GLAf)
3g: ALPHA D-GALACTOSE (GLAg)
3h: ALPHA D-GALACTOSE (GLAh)
3i: ALPHA D-GALACTOSE (GLAi)
3j: ALPHA D-GALACTOSE (GLAj)
3k: ALPHA D-GALACTOSE (GLAk)
3l: ALPHA D-GALACTOSE (GLAl)
3m: ALPHA D-GALACTOSE (GLAm)
3n: ALPHA D-GALACTOSE (GLAn)
3o: ALPHA D-GALACTOSE (GLAo)
3p: ALPHA D-GALACTOSE (GLAp)
3q: ALPHA D-GALACTOSE (GLAq)
3r: ALPHA D-GALACTOSE (GLAr)
3s: ALPHA D-GALACTOSE (GLAs)
3t: ALPHA D-GALACTOSE (GLAt)
3u: ALPHA D-GALACTOSE (GLAu)
3v: ALPHA D-GALACTOSE (GLAv)
3w: ALPHA D-GALACTOSE (GLAw)
3x: ALPHA D-GALACTOSE (GLAx)
3y: ALPHA D-GALACTOSE (GLAy)
3z: ALPHA D-GALACTOSE (GLAz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BGC
33
Ligand/Ion
BETA-D-GLUCOSE
2
GAL
60
Ligand/Ion
BETA-D-GALACTOSE
3
GLA
49
Ligand/Ion
ALPHA D-GALACTOSE
[
close Hetero Component info
]
Sites
(142, 142)
Info
All Sites
001: AC1 (SOFTWARE)
002: AC2 (SOFTWARE)
003: AC3 (SOFTWARE)
004: AC4 (SOFTWARE)
005: AC5 (SOFTWARE)
006: AC6 (SOFTWARE)
007: AC7 (SOFTWARE)
008: AC8 (SOFTWARE)
009: AC9 (SOFTWARE)
010: BC1 (SOFTWARE)
011: BC2 (SOFTWARE)
012: BC3 (SOFTWARE)
013: BC4 (SOFTWARE)
014: BC5 (SOFTWARE)
015: BC6 (SOFTWARE)
016: BC7 (SOFTWARE)
017: BC8 (SOFTWARE)
018: BC9 (SOFTWARE)
019: CC1 (SOFTWARE)
020: CC2 (SOFTWARE)
021: CC3 (SOFTWARE)
022: CC4 (SOFTWARE)
023: CC5 (SOFTWARE)
024: CC6 (SOFTWARE)
025: CC7 (SOFTWARE)
026: CC8 (SOFTWARE)
027: CC9 (SOFTWARE)
028: DC1 (SOFTWARE)
029: DC2 (SOFTWARE)
030: DC3 (SOFTWARE)
031: DC4 (SOFTWARE)
032: DC5 (SOFTWARE)
033: DC6 (SOFTWARE)
034: DC7 (SOFTWARE)
035: DC8 (SOFTWARE)
036: DC9 (SOFTWARE)
037: EC1 (SOFTWARE)
038: EC2 (SOFTWARE)
039: EC3 (SOFTWARE)
040: EC4 (SOFTWARE)
041: EC5 (SOFTWARE)
042: EC6 (SOFTWARE)
043: EC7 (SOFTWARE)
044: EC8 (SOFTWARE)
045: EC9 (SOFTWARE)
046: FC1 (SOFTWARE)
047: FC2 (SOFTWARE)
048: FC3 (SOFTWARE)
049: FC4 (SOFTWARE)
050: FC5 (SOFTWARE)
051: FC6 (SOFTWARE)
052: FC7 (SOFTWARE)
053: FC8 (SOFTWARE)
054: FC9 (SOFTWARE)
055: GC1 (SOFTWARE)
056: GC2 (SOFTWARE)
057: GC3 (SOFTWARE)
058: GC4 (SOFTWARE)
059: GC5 (SOFTWARE)
060: GC6 (SOFTWARE)
061: GC7 (SOFTWARE)
062: GC8 (SOFTWARE)
063: GC9 (SOFTWARE)
064: HC1 (SOFTWARE)
065: HC2 (SOFTWARE)
066: HC3 (SOFTWARE)
067: HC4 (SOFTWARE)
068: HC5 (SOFTWARE)
069: HC6 (SOFTWARE)
070: HC7 (SOFTWARE)
071: HC8 (SOFTWARE)
072: HC9 (SOFTWARE)
073: IC1 (SOFTWARE)
074: IC2 (SOFTWARE)
075: IC3 (SOFTWARE)
076: IC4 (SOFTWARE)
077: IC5 (SOFTWARE)
078: IC6 (SOFTWARE)
079: IC7 (SOFTWARE)
080: IC8 (SOFTWARE)
081: IC9 (SOFTWARE)
082: JC1 (SOFTWARE)
083: JC2 (SOFTWARE)
084: JC3 (SOFTWARE)
085: JC4 (SOFTWARE)
086: JC5 (SOFTWARE)
087: JC6 (SOFTWARE)
088: JC7 (SOFTWARE)
089: JC8 (SOFTWARE)
090: JC9 (SOFTWARE)
091: KC1 (SOFTWARE)
092: KC2 (SOFTWARE)
093: KC3 (SOFTWARE)
094: KC4 (SOFTWARE)
095: KC5 (SOFTWARE)
096: KC6 (SOFTWARE)
097: KC7 (SOFTWARE)
098: KC8 (SOFTWARE)
099: KC9 (SOFTWARE)
100: LC1 (SOFTWARE)
101: LC2 (SOFTWARE)
102: LC3 (SOFTWARE)
103: LC4 (SOFTWARE)
104: LC5 (SOFTWARE)
105: LC6 (SOFTWARE)
106: LC7 (SOFTWARE)
107: LC8 (SOFTWARE)
108: LC9 (SOFTWARE)
109: MC1 (SOFTWARE)
110: MC2 (SOFTWARE)
111: MC3 (SOFTWARE)
112: MC4 (SOFTWARE)
113: MC5 (SOFTWARE)
114: MC6 (SOFTWARE)
115: MC7 (SOFTWARE)
116: MC8 (SOFTWARE)
117: MC9 (SOFTWARE)
118: NC1 (SOFTWARE)
119: NC2 (SOFTWARE)
120: NC3 (SOFTWARE)
121: NC4 (SOFTWARE)
122: NC5 (SOFTWARE)
123: NC6 (SOFTWARE)
124: NC7 (SOFTWARE)
125: NC8 (SOFTWARE)
126: NC9 (SOFTWARE)
127: OC1 (SOFTWARE)
128: OC2 (SOFTWARE)
129: OC3 (SOFTWARE)
130: OC4 (SOFTWARE)
131: OC5 (SOFTWARE)
132: OC6 (SOFTWARE)
133: OC7 (SOFTWARE)
134: OC8 (SOFTWARE)
135: OC9 (SOFTWARE)
136: PC1 (SOFTWARE)
137: PC2 (SOFTWARE)
138: PC3 (SOFTWARE)
139: PC4 (SOFTWARE)
140: PC5 (SOFTWARE)
141: PC6 (SOFTWARE)
142: PC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
001
AC1
SOFTWARE
THR A:1131 , ASN A:1132 , ARG A:1133 , PHE A:1163 , GAL A:1191 , HOH A:5228 , ASP B:1216
BINDING SITE FOR RESIDUE GLA A 1190
002
AC2
SOFTWARE
THR A:1101 , THR A:1154 , ASN A:1155 , GLY A:1162 , GLA A:1190 , BGC A:1192
BINDING SITE FOR RESIDUE GAL A 1191
003
AC3
SOFTWARE
ASN A:1155 , GAL A:1191
BINDING SITE FOR RESIDUE BGC A 1192
004
AC4
SOFTWARE
PHE F:2130 , THR F:2131 , ASN F:2132 , ARG F:2133 , GLY F:2162 , PHE F:2163 , GAL F:2191 , HOH F:5033 , HOH F:5095 , ASP G:2216
BINDING SITE FOR RESIDUE GLA F 2190
005
AC5
SOFTWARE
THR F:2154 , ASN F:2155 , GLY F:2162 , GLA F:2190 , BGC F:2192
BINDING SITE FOR RESIDUE GAL F 2191
006
AC6
SOFTWARE
ASN F:2155 , GAL F:2191
BINDING SITE FOR RESIDUE BGC F 2192
007
AC7
SOFTWARE
THR K:3131 , ASN K:3132 , ARG K:3133 , PHE K:3163 , GAL K:3191 , HOH K:5090 , HOH K:5091 , ASP L:3216
BINDING SITE FOR RESIDUE GLA K 3190
008
AC8
SOFTWARE
THR K:3154 , ASN K:3155 , GLY K:3162 , GLA K:3190 , BGC K:3192 , HOH K:5054
BINDING SITE FOR RESIDUE GAL K 3191
009
AC9
SOFTWARE
GAL K:3191 , HOH K:5054
BINDING SITE FOR RESIDUE BGC K 3192
010
BC1
SOFTWARE
THR P:4131 , ASN P:4132 , ARG P:4133 , PHE P:4163 , GAL P:4191 , HOH P:5201 , ASP Q:4216
BINDING SITE FOR RESIDUE GLA P 4190
011
BC2
SOFTWARE
THR P:4101 , THR P:4154 , ASN P:4155 , GLY P:4162 , GLA P:4190 , BGC P:4192 , HOH P:5201 , HOH P:5236
BINDING SITE FOR RESIDUE GAL P 4191
012
BC3
SOFTWARE
ASN P:4155 , GAL P:4191 , HOH P:5315
BINDING SITE FOR RESIDUE BGC P 4192
013
BC4
SOFTWARE
THR B:1231 , ASN B:1232 , ARG B:1233 , PHE B:1263 , GAL B:1291 , HOH B:5007 , HOH B:5176 , ASP C:1316
BINDING SITE FOR RESIDUE GLA B 1290
014
BC5
SOFTWARE
THR B:1254 , ASN B:1255 , GLY B:1262 , GLA B:1290 , BGC B:1292 , HOH B:5176 , HOH B:5182
BINDING SITE FOR RESIDUE GAL B 1291
015
BC6
SOFTWARE
ASN B:1255 , GAL B:1291
BINDING SITE FOR RESIDUE BGC B 1292
016
BC7
SOFTWARE
THR G:2231 , ASN G:2232 , ARG G:2233 , GLY G:2262 , PHE G:2263 , GAL G:2291 , HOH G:5211 , ASP H:2316
BINDING SITE FOR RESIDUE GLA G 2290
017
BC8
SOFTWARE
THR G:2254 , ASN G:2255 , GLY G:2262 , GLA G:2290 , BGC G:2292 , HOH G:5124
BINDING SITE FOR RESIDUE GAL G 2291
018
BC9
SOFTWARE
GAL G:2291 , LYS T:4508 , THR T:4549
BINDING SITE FOR RESIDUE BGC G 2292
019
CC1
SOFTWARE
THR L:3231 , ASN L:3232 , ARG L:3233 , PHE L:3263 , GAL L:3291 , HOH L:5056 , ASP M:3316
BINDING SITE FOR RESIDUE GLA L 3290
020
CC2
SOFTWARE
THR L:3201 , THR L:3254 , ASN L:3255 , GLY L:3262 , GLA L:3290 , BGC L:3292 , HOH L:5056 , HOH L:5265
BINDING SITE FOR RESIDUE GAL L 3291
021
CC3
SOFTWARE
ASN L:3255 , GAL L:3291 , HOH L:5056 , HOH L:5263
BINDING SITE FOR RESIDUE BGC L 3292
022
CC4
SOFTWARE
THR Q:4231 , ASN Q:4232 , ARG Q:4233 , GLY Q:4262 , PHE Q:4263 , GAL Q:4291 , ASP R:4316
BINDING SITE FOR RESIDUE GLA Q 4290
023
CC5
SOFTWARE
THR Q:4254 , ASN Q:4255 , GLY Q:4262 , GLA Q:4290 , BGC Q:4292 , HOH Q:5071
BINDING SITE FOR RESIDUE GAL Q 4291
024
CC6
SOFTWARE
ASN Q:4255 , GAL Q:4291 , HOH Q:5071 , HOH Q:5226
BINDING SITE FOR RESIDUE BGC Q 4292
025
CC7
SOFTWARE
THR C:1331 , ASN C:1332 , ARG C:1333 , PHE C:1363 , GAL C:1391 , ASP D:1416
BINDING SITE FOR RESIDUE GLA C 1390
026
CC8
SOFTWARE
THR C:1301 , THR C:1354 , ASN C:1355 , GLY C:1362 , GLA C:1390 , BGC C:1392 , HOH C:5086 , HOH C:5089
BINDING SITE FOR RESIDUE GAL C 1391
027
CC9
SOFTWARE
ASN C:1355 , GAL C:1391 , HOH C:5086
BINDING SITE FOR RESIDUE BGC C 1392
028
DC1
SOFTWARE
THR H:2331 , ASN H:2332 , ARG H:2333 , GLY H:2362 , PHE H:2363 , GAL H:2391 , ASP I:2416
BINDING SITE FOR RESIDUE GLA H 2390
029
DC2
SOFTWARE
THR H:2354 , ASN H:2355 , GLY H:2362 , GLA H:2390 , BGC H:2392 , HOH H:5081
BINDING SITE FOR RESIDUE GAL H 2391
030
DC3
SOFTWARE
ASN H:2355 , GAL H:2391
BINDING SITE FOR RESIDUE BGC H 2392
031
DC4
SOFTWARE
THR M:3331 , ASN M:3332 , ARG M:3333 , PHE M:3363 , GAL M:3391 , HOH M:5189 , ASP N:3416
BINDING SITE FOR RESIDUE GLA M 3390
032
DC5
SOFTWARE
THR M:3301 , THR M:3354 , ASN M:3355 , GLY M:3362 , GLA M:3390 , BGC M:3392
BINDING SITE FOR RESIDUE GAL M 3391
033
DC6
SOFTWARE
GAL M:3391
BINDING SITE FOR RESIDUE BGC M 3392
034
DC7
SOFTWARE
THR R:4331 , ASN R:4332 , ARG R:4333 , PHE R:4363 , GAL R:4391 , HOH R:5135 , ASP S:4416
BINDING SITE FOR RESIDUE GLA R 4390
035
DC8
SOFTWARE
THR R:4301 , THR R:4354 , ASN R:4355 , GLY R:4362 , GLA R:4390 , BGC R:4392 , HOH R:5066
BINDING SITE FOR RESIDUE GAL R 4391
036
DC9
SOFTWARE
THR D:1449 , GAL R:4391
BINDING SITE FOR RESIDUE BGC R 4392
037
EC1
SOFTWARE
THR D:1431 , ASN D:1432 , ARG D:1433 , GLY D:1462 , PHE D:1463 , GAL D:1491 , HOH D:5018 , ASP E:1516 , HOH E:5264
BINDING SITE FOR RESIDUE GLA D 1490
038
EC2
SOFTWARE
THR D:1454 , ASN D:1455 , GLY D:1462 , GLA D:1490 , BGC D:1492 , HOH D:5018 , HOH D:5301
BINDING SITE FOR RESIDUE GAL D 1491
039
EC3
SOFTWARE
ASN D:1455 , GAL D:1491
BINDING SITE FOR RESIDUE BGC D 1492
040
EC4
SOFTWARE
THR I:2431 , ASN I:2432 , ARG I:2433 , PHE I:2463 , GAL I:2491 , HOH I:5322 , ASP J:2516
BINDING SITE FOR RESIDUE GLA I 2490
041
EC5
SOFTWARE
THR I:2454 , ASN I:2455 , GLY I:2462 , GLA I:2490 , BGC I:2492
BINDING SITE FOR RESIDUE GAL I 2491
042
EC6
SOFTWARE
ASN I:2455 , GAL I:2491
BINDING SITE FOR RESIDUE BGC I 2492
043
EC7
SOFTWARE
THR N:3431 , ASN N:3432 , ARG N:3433 , GLY N:3462 , PHE N:3463 , GAL N:3491 , HOH N:5165 , ASP O:3516
BINDING SITE FOR RESIDUE GLA N 3490
044
EC8
SOFTWARE
THR N:3454 , ASN N:3455 , GLY N:3462 , GLA N:3490 , BGC N:3492 , HOH N:5046 , HOH N:5165
BINDING SITE FOR RESIDUE GAL N 3491
045
EC9
SOFTWARE
GAL N:3491
BINDING SITE FOR RESIDUE BGC N 3492
046
FC1
SOFTWARE
THR S:4431 , ASN S:4432 , ARG S:4433 , GLY S:4462 , PHE S:4463 , GAL S:4491 , ASP T:4516
BINDING SITE FOR RESIDUE GLA S 4490
047
FC2
SOFTWARE
THR S:4401 , THR S:4454 , ASN S:4455 , GLY S:4462 , GLA S:4490 , BGC S:4492
BINDING SITE FOR RESIDUE GAL S 4491
048
FC3
SOFTWARE
GAL S:4491
BINDING SITE FOR RESIDUE BGC S 4492
049
FC4
SOFTWARE
ASP A:1116 , THR E:1531 , ASN E:1532 , ARG E:1533 , PHE E:1563 , SER E:1564 , GAL E:1591
BINDING SITE FOR RESIDUE GLA E 1590
050
FC5
SOFTWARE
THR E:1501 , THR E:1554 , ASN E:1555 , GLY E:1562 , GLA E:1590 , BGC E:1592
BINDING SITE FOR RESIDUE GAL E 1591
051
FC6
SOFTWARE
ASN E:1555 , GAL E:1591 , HOH E:5326 , HOH E:5337
BINDING SITE FOR RESIDUE BGC E 1592
052
FC7
SOFTWARE
ASP F:2116 , THR J:2531 , ASN J:2532 , ARG J:2533 , GLY J:2562 , PHE J:2563 , GAL J:2591
BINDING SITE FOR RESIDUE GLA J 2590
053
FC8
SOFTWARE
THR J:2554 , ASN J:2555 , GLY J:2562 , GLA J:2590 , BGC J:2592 , HOH J:5132 , HOH J:5214 , HOH J:5225
BINDING SITE FOR RESIDUE GAL J 2591
054
FC9
SOFTWARE
GAL J:2591
BINDING SITE FOR RESIDUE BGC J 2592
055
GC1
SOFTWARE
ASP K:3116 , THR O:3531 , ASN O:3532 , ARG O:3533 , GLY O:3562 , PHE O:3563 , GAL O:3591
BINDING SITE FOR RESIDUE GLA O 3590
056
GC2
SOFTWARE
THR O:3554 , ASN O:3555 , GLY O:3562 , GLA O:3590 , BGC O:3592 , HOH O:5108 , HOH O:5162
BINDING SITE FOR RESIDUE GAL O 3591
057
GC3
SOFTWARE
GAL O:3591 , HOH O:5108
BINDING SITE FOR RESIDUE BGC O 3592
058
GC4
SOFTWARE
ASP P:4116 , THR T:4531 , ASN T:4532 , ARG T:4533 , GLY T:4562 , PHE T:4563 , GAL T:4591
BINDING SITE FOR RESIDUE GLA T 4590
059
GC5
SOFTWARE
THR T:4554 , ASN T:4555 , GLY T:4562 , GLA T:4590 , BGC T:4592
BINDING SITE FOR RESIDUE GAL T 4591
060
GC6
SOFTWARE
GAL T:4591
BINDING SITE FOR RESIDUE BGC T 4592
061
GC7
SOFTWARE
ASN A:1132 , ARG A:1133 , TRP A:1134 , ASN A:1135 , GAL A:1181 , ASP B:1218
BINDING SITE FOR RESIDUE GLA A 1180
062
GC8
SOFTWARE
TRP A:1134 , GLA A:1180 , HOH A:5138
BINDING SITE FOR RESIDUE GAL A 1181
063
GC9
SOFTWARE
ASN F:2132 , ARG F:2133 , TRP F:2134 , ASN F:2135 , GAL F:2181 , HOH F:5105 , ASP G:2218 , TRP G:2234
BINDING SITE FOR RESIDUE GLA F 2180
064
HC1
SOFTWARE
TRP F:2134 , GLA F:2180 , BGC F:2182 , HOH F:5105
BINDING SITE FOR RESIDUE GAL F 2181
065
HC2
SOFTWARE
GAL F:2181
BINDING SITE FOR RESIDUE BGC F 2182
066
HC3
SOFTWARE
ARG K:3133 , TRP K:3134 , ASN K:3135 , GAL K:3181 , ASP L:3218
BINDING SITE FOR RESIDUE GLA K 3180
067
HC4
SOFTWARE
TRP K:3134 , GLA K:3180
BINDING SITE FOR RESIDUE GAL K 3181
068
HC5
SOFTWARE
ARG P:4133 , TRP P:4134 , ASN P:4135 , GAL P:4181 , ASP Q:4218 , TRP Q:4234
BINDING SITE FOR RESIDUE GLA P 4180
069
HC6
SOFTWARE
TRP P:4134 , GLA P:4180 , HOH P:5249
BINDING SITE FOR RESIDUE GAL P 4181
070
HC7
SOFTWARE
ASN B:1232 , ARG B:1233 , TRP B:1234 , ASN B:1235 , GAL B:1281 , HOH B:5324 , ASP C:1318 , TRP C:1334
BINDING SITE FOR RESIDUE GLA B 1280
071
HC8
SOFTWARE
TRP B:1234 , GLA B:1280 , HOH B:5310
BINDING SITE FOR RESIDUE GAL B 1281
072
HC9
SOFTWARE
ARG G:2233 , TRP G:2234 , ASN G:2235 , GAL G:2281 , ASP H:2318
BINDING SITE FOR RESIDUE GLA G 2280
073
IC1
SOFTWARE
TRP G:2234 , GLA G:2280 , HOH G:5117 , HOH G:5160 , HOH G:5163
BINDING SITE FOR RESIDUE GAL G 2281
074
IC2
SOFTWARE
ARG L:3233 , TRP L:3234 , ASN L:3235 , GAL L:3281 , ASP M:3318
BINDING SITE FOR RESIDUE GLA L 3280
075
IC3
SOFTWARE
TRP L:3234 , GLA L:3280 , HOH L:5150 , HOH L:5151
BINDING SITE FOR RESIDUE GAL L 3281
076
IC4
SOFTWARE
ARG Q:4233 , TRP Q:4234 , ASN Q:4235 , GAL Q:4281 , HOH Q:5141 , TYR R:4314 , ASP R:4318
BINDING SITE FOR RESIDUE GLA Q 4280
077
IC5
SOFTWARE
TRP Q:4234 , GLA Q:4280 , BGC Q:4282
BINDING SITE FOR RESIDUE GAL Q 4281
078
IC6
SOFTWARE
GAL Q:4281
BINDING SITE FOR RESIDUE BGC Q 4282
079
IC7
SOFTWARE
ARG C:1333 , TRP C:1334 , ASN C:1335 , GAL C:1381 , ASP D:1418
BINDING SITE FOR RESIDUE GLA C 1380
080
IC8
SOFTWARE
TRP C:1334 , GLA C:1380
BINDING SITE FOR RESIDUE GAL C 1381
081
IC9
SOFTWARE
ARG H:2333 , TRP H:2334 , ASN H:2335 , GAL H:2381 , TYR I:2414 , ASP I:2418 , TRP I:2434
BINDING SITE FOR RESIDUE GLA H 2380
082
JC1
SOFTWARE
TRP H:2334 , GLA H:2380 , HOH H:5172 , HOH H:5299
BINDING SITE FOR RESIDUE GAL H 2381
083
JC2
SOFTWARE
ASN M:3332 , ARG M:3333 , TRP M:3334 , ASN M:3335 , GAL M:3381 , TYR N:3414 , ASP N:3418
BINDING SITE FOR RESIDUE GLA M 3380
084
JC3
SOFTWARE
TRP M:3334 , GLA M:3380 , HOH M:5279 , HOH M:5306
BINDING SITE FOR RESIDUE GAL M 3381
085
JC4
SOFTWARE
ARG R:4333 , TRP R:4334 , ASN R:4335 , GAL R:4381 , ASP S:4418
BINDING SITE FOR RESIDUE GLA R 4380
086
JC5
SOFTWARE
TRP R:4334 , GLA R:4380 , BGC R:4382
BINDING SITE FOR RESIDUE GAL R 4381
087
JC6
SOFTWARE
GAL R:4381 , HOH R:5328
BINDING SITE FOR RESIDUE BGC R 4382
088
JC7
SOFTWARE
ARG D:1433 , TRP D:1434 , ASN D:1435 , GAL D:1481 , ASP E:1518
BINDING SITE FOR RESIDUE GLA D 1480
089
JC8
SOFTWARE
TRP D:1434 , GLA D:1480 , HOH D:5205
BINDING SITE FOR RESIDUE GAL D 1481
090
JC9
SOFTWARE
ARG I:2433 , TRP I:2434 , ASN I:2435 , GAL I:2481 , TYR J:2514 , ASP J:2518
BINDING SITE FOR RESIDUE GLA I 2480
091
KC1
SOFTWARE
TRP I:2434 , GLA I:2480 , HOH I:5209 , HOH I:5262
BINDING SITE FOR RESIDUE GAL I 2481
092
KC2
SOFTWARE
ARG N:3433 , TRP N:3434 , ASN N:3435 , GAL N:3481 , ASP O:3518
BINDING SITE FOR RESIDUE GLA N 3480
093
KC3
SOFTWARE
GLA N:3480 , HOH N:5143 , HOH N:5239
BINDING SITE FOR RESIDUE GAL N 3481
094
KC4
SOFTWARE
ARG S:4433 , TRP S:4434 , ASN S:4435 , GAL S:4481 , ASP T:4518 , TRP T:4534
BINDING SITE FOR RESIDUE GLA S 4480
095
KC5
SOFTWARE
TRP S:4434 , GLA S:4480 , HOH S:5237
BINDING SITE FOR RESIDUE GAL S 4481
096
KC6
SOFTWARE
ASP A:1118 , TRP A:1134 , ARG E:1533 , TRP E:1534 , ASN E:1535 , GAL E:1581
BINDING SITE FOR RESIDUE GLA E 1580
097
KC7
SOFTWARE
TRP E:1534 , GLA E:1580 , BGC E:1582
BINDING SITE FOR RESIDUE GAL E 1581
098
KC8
SOFTWARE
GAL E:1581
BINDING SITE FOR RESIDUE BGC E 1582
099
KC9
SOFTWARE
ASP F:2118 , ASN J:2532 , ARG J:2533 , TRP J:2534 , ASN J:2535 , GAL J:2581
BINDING SITE FOR RESIDUE GLA J 2580
100
LC1
SOFTWARE
TRP J:2534 , GLA J:2580 , BGC J:2582
BINDING SITE FOR RESIDUE GAL J 2581
101
LC2
SOFTWARE
GAL J:2581
BINDING SITE FOR RESIDUE BGC J 2582
102
LC3
SOFTWARE
TYR K:3114 , ASP K:3118 , ASN O:3532 , ARG O:3533 , TRP O:3534 , ASN O:3535 , GAL O:3581
BINDING SITE FOR RESIDUE GLA O 3580
103
LC4
SOFTWARE
TRP O:3534 , GLA O:3580 , HOH O:5142 , HOH O:5274
BINDING SITE FOR RESIDUE GAL O 3581
104
LC5
SOFTWARE
ASP P:4118 , TRP P:4134 , ARG T:4533 , TRP T:4534 , ASN T:4535 , GAL T:4581
BINDING SITE FOR RESIDUE GLA T 4580
105
LC6
SOFTWARE
TRP T:4534 , GLA T:4580 , HOH T:5246
BINDING SITE FOR RESIDUE GAL T 4581
106
LC7
SOFTWARE
ASN A:1115 , THR A:1121 , GLU A:1128 , GLY A:1160 , GAL A:1171 , HOH H:5191
BINDING SITE FOR RESIDUE GLA A 1170
107
LC8
SOFTWARE
ASP A:1117 , PHE A:1130 , GLY A:1160 , GLA A:1170 , BGC A:1172
BINDING SITE FOR RESIDUE GAL A 1171
108
LC9
SOFTWARE
GAL A:1171 , HOH A:5323 , THR H:2346
BINDING SITE FOR RESIDUE BGC A 1172
109
MC1
SOFTWARE
THR F:2121 , GLU F:2128 , PHE F:2130 , GLY F:2160 , GAL F:2171 , HOH F:5232
BINDING SITE FOR RESIDUE GLA F 2170
110
MC2
SOFTWARE
LYS C:1308 , THR C:1349 , HOH C:5015 , HOH C:5154 , ASP F:2117 , PHE F:2130 , GLY F:2160 , GLA F:2170 , BGC F:2172
BINDING SITE FOR RESIDUE GAL F 2171
111
MC3
SOFTWARE
LYS C:1308 , THR C:1346 , GAL F:2171
BINDING SITE FOR RESIDUE BGC F 2172
112
MC4
SOFTWARE
LYS P:4113 , ASN P:4115 , THR P:4121 , GLU P:4128 , PHE P:4130 , GLY P:4160 , HOH P:5195 , HOH P:5340
BINDING SITE FOR RESIDUE GAL P 4170
113
MC5
SOFTWARE
LYS B:1213 , ASN B:1215 , THR B:1221 , GLU B:1228 , PHE B:1230 , GLY B:1260 , GAL B:1271
BINDING SITE FOR RESIDUE GLA B 1270
114
MC6
SOFTWARE
ASP B:1217 , THR B:1219 , PHE B:1230 , GLY B:1260 , GLA B:1270 , HOH B:5251
BINDING SITE FOR RESIDUE GAL B 1271
115
MC7
SOFTWARE
ASN Q:4215 , THR Q:4221 , GLU Q:4228 , PHE Q:4230 , GLY Q:4260 , GAL Q:4271 , HOH Q:5087
BINDING SITE FOR RESIDUE GLA Q 4270
116
MC8
SOFTWARE
ASP Q:4217 , PHE Q:4230 , GLY Q:4260 , GLA Q:4270 , BGC Q:4272 , LYS S:4408 , THR S:4449 , HOH S:5253
BINDING SITE FOR RESIDUE GAL Q 4271
117
MC9
SOFTWARE
GAL Q:4271 , HOH Q:5266 , LYS S:4408 , THR S:4446
BINDING SITE FOR RESIDUE BGC Q 4272
118
NC1
SOFTWARE
ASN H:2315 , THR H:2321 , GLU H:2328 , PHE H:2330 , GLY H:2360 , GAL H:2371 , LYS P:4108
BINDING SITE FOR RESIDUE GLA H 2370
119
NC2
SOFTWARE
ASP H:2317 , THR H:2319 , PHE H:2330 , GLY H:2360 , GLA H:2370 , BGC H:2372 , LYS P:4108 , GLY P:4147
BINDING SITE FOR RESIDUE GAL H 2371
120
NC3
SOFTWARE
GAL H:2371 , THR P:4146
BINDING SITE FOR RESIDUE BGC H 2372
121
NC4
SOFTWARE
LYS F:2108 , THR M:3321 , GLU M:3328 , PHE M:3330 , GLY M:3360 , GAL M:3371 , HOH M:5342
BINDING SITE FOR RESIDUE GLA M 3370
122
NC5
SOFTWARE
HOH F:5170 , ASP M:3317 , PHE M:3330 , GLY M:3360 , GLA M:3370 , BGC M:3372
BINDING SITE FOR RESIDUE GAL M 3371
123
NC6
SOFTWARE
HOH F:5170 , ILE G:2245 , GAL M:3371 , HOH M:5106 , HOH M:5159
BINDING SITE FOR RESIDUE BGC M 3372
124
NC7
SOFTWARE
ASN D:1415 , THR D:1421 , GLU D:1428 , PHE D:1430 , GLY D:1460 , GAL D:1471 , LYS O:3508
BINDING SITE FOR RESIDUE GLA D 1470
125
NC8
SOFTWARE
ASP D:1417 , THR D:1419 , PHE D:1430 , GLY D:1460 , GLA D:1470 , BGC D:1472 , HOH O:5235
BINDING SITE FOR RESIDUE GAL D 1471
126
NC9
SOFTWARE
GAL D:1471 , ILE K:3145
BINDING SITE FOR RESIDUE BGC D 1472
127
OC1
SOFTWARE
ASN S:4415 , THR S:4421 , GLU S:4428 , GLY S:4460 , GAL S:4471
BINDING SITE FOR RESIDUE GLA S 4470
128
OC2
SOFTWARE
ASP S:4417 , THR S:4419 , PHE S:4430 , GLY S:4460 , GLA S:4470 , BGC S:4472
BINDING SITE FOR RESIDUE GAL S 4471
129
OC3
SOFTWARE
THR E:1546 , GAL S:4471 , HOH S:5129
BINDING SITE FOR RESIDUE BGC S 4472
130
OC4
SOFTWARE
ASN O:3515 , THR O:3521 , GLU O:3528 , PHE O:3530 , GLY O:3560 , GAL O:3571 , HOH O:5109 , HOH O:5282
BINDING SITE FOR RESIDUE GLA O 3570
131
OC5
SOFTWARE
LYS L:3208 , THR L:3249 , HOH L:5044 , HOH L:5164 , ASP O:3517 , PHE O:3530 , GLY O:3560 , GLA O:3570 , BGC O:3572 , HOH O:5204
BINDING SITE FOR RESIDUE GAL O 3571
132
OC6
SOFTWARE
LYS L:3208 , THR L:3246 , GAL O:3571
BINDING SITE FOR RESIDUE BGC O 3572
133
OC7
SOFTWARE
LYS C:1313 , THR C:1321 , GLU C:1328 , GLY C:1360 , HOH C:5133 , HOH C:5287
BINDING SITE FOR RESIDUE GAL C 1370
134
OC8
SOFTWARE
THR E:1521 , GLU E:1528 , GLY E:1560
BINDING SITE FOR RESIDUE GAL E 1570
135
OC9
SOFTWARE
ASN G:2215 , THR G:2221 , GLU G:2228 , PHE G:2230 , GLY G:2260
BINDING SITE FOR RESIDUE GAL G 2270
136
PC1
SOFTWARE
ASN I:2415 , THR I:2421 , GLU I:2428 , GLY I:2460 , HOH I:5270 , HOH I:5286
BINDING SITE FOR RESIDUE GAL I 2470
137
PC2
SOFTWARE
LYS J:2513 , ASN J:2515 , THR J:2521 , GLU J:2528 , GLY J:2560 , HOH J:5302
BINDING SITE FOR RESIDUE GAL J 2570
138
PC3
SOFTWARE
ASN K:3115 , THR K:3119 , THR K:3121 , GLU K:3128 , PHE K:3130 , GLY K:3160 , HOH K:5148 , HOH K:5294
BINDING SITE FOR RESIDUE GAL K 3170
139
PC4
SOFTWARE
LYS L:3213 , ASN L:3215 , THR L:3221 , GLU L:3228 , PHE L:3230 , GLY L:3260 , HOH L:5203
BINDING SITE FOR RESIDUE GAL L 3270
140
PC5
SOFTWARE
LYS N:3413 , ASN N:3415 , THR N:3421 , GLU N:3428 , GLY N:3460 , HOH N:5188 , HOH N:5276
BINDING SITE FOR RESIDUE GAL N 3470
141
PC6
SOFTWARE
THR R:4321 , GLU R:4328 , GLY R:4360
BINDING SITE FOR RESIDUE GAL R 4370
142
PC7
SOFTWARE
LYS T:4513 , ASN T:4515 , THR T:4521 , GLU T:4528 , GLY T:4560 , HOH T:5269
BINDING SITE FOR RESIDUE GAL T 4570
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 20)
Info
All SCOP Domains
1a: SCOP_d1bosa_ (A:)
1b: SCOP_d1bosb_ (B:)
1c: SCOP_d1bosc_ (C:)
1d: SCOP_d1bosd_ (D:)
1e: SCOP_d1bose_ (E:)
1f: SCOP_d1bosf_ (F:)
1g: SCOP_d1bosg_ (G:)
1h: SCOP_d1bosh_ (H:)
1i: SCOP_d1bosi_ (I:)
1j: SCOP_d1bosj_ (J:)
1k: SCOP_d1bosk_ (K:)
1l: SCOP_d1bosl_ (L:)
1m: SCOP_d1bosm_ (M:)
1n: SCOP_d1bosn_ (N:)
1o: SCOP_d1boso_ (O:)
1p: SCOP_d1bosp_ (P:)
1q: SCOP_d1bosq_ (Q:)
1r: SCOP_d1bosr_ (R:)
1s: SCOP_d1boss_ (S:)
1t: SCOP_d1bost_ (T:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
OB-fold
(1179)
Superfamily
:
Bacterial enterotoxins
(188)
Family
:
Bacterial AB5 toxins, B-subunits
(85)
Protein domain
:
Verotoxin-1/shiga-toxin, B-pentamer
(19)
Escherichia coli [TaxId: 562]
(14)
1a
d1bosa_
A:
1b
d1bosb_
B:
1c
d1bosc_
C:
1d
d1bosd_
D:
1e
d1bose_
E:
1f
d1bosf_
F:
1g
d1bosg_
G:
1h
d1bosh_
H:
1i
d1bosi_
I:
1j
d1bosj_
J:
1k
d1bosk_
K:
1l
d1bosl_
L:
1m
d1bosm_
M:
1n
d1bosn_
N:
1o
d1boso_
O:
1p
d1bosp_
P:
1q
d1bosq_
Q:
1r
d1bosr_
R:
1s
d1boss_
S:
1t
d1bost_
T:
[
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]
CATH Domains
(1, 20)
Info
all CATH domains
1a: CATH_1bosA00 (A:1101-1169)
1b: CATH_1bosB00 (B:1201-1269)
1c: CATH_1bosK00 (K:3101-3169)
1d: CATH_1bosL00 (L:3201-3269)
1e: CATH_1bosM00 (M:3301-3369)
1f: CATH_1bosN00 (N:3401-3469)
1g: CATH_1bosO00 (O:3501-3569)
1h: CATH_1bosP00 (P:4101-4169)
1i: CATH_1bosQ00 (Q:4201-4269)
1j: CATH_1bosR00 (R:4301-4369)
1k: CATH_1bosS00 (S:4401-4469)
1l: CATH_1bosT00 (T:4501-4569)
1m: CATH_1bosC00 (C:1301-1369)
1n: CATH_1bosD00 (D:1401-1469)
1o: CATH_1bosE00 (E:1501-1569)
1p: CATH_1bosF00 (F:2101-2169)
1q: CATH_1bosG00 (G:2201-2269)
1r: CATH_1bosH00 (H:2301-2369)
1s: CATH_1bosI00 (I:2401-2469)
1t: CATH_1bosJ00 (J:2501-2569)
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
OB fold (Dihydrolipoamide Acetyltransferase, E2P)
(1040)
Homologous Superfamily
:
[code=2.40.50.70, no name defined]
(18)
, (Phage h30, enterobacteria phage h-19b)
(2)
1a
1bosA00
A:1101-1169
1b
1bosB00
B:1201-1269
1c
1bosK00
K:3101-3169
1d
1bosL00
L:3201-3269
1e
1bosM00
M:3301-3369
1f
1bosN00
N:3401-3469
1g
1bosO00
O:3501-3569
1h
1bosP00
P:4101-4169
1i
1bosQ00
Q:4201-4269
1j
1bosR00
R:4301-4369
1k
1bosS00
S:4401-4469
1l
1bosT00
T:4501-4569
1m
1bosC00
C:1301-1369
1n
1bosD00
D:1401-1469
1o
1bosE00
E:1501-1569
1p
1bosF00
F:2101-2169
1q
1bosG00
G:2201-2269
1r
1bosH00
H:2301-2369
1s
1bosI00
I:2401-2469
1t
1bosJ00
J:2501-2569
[
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]
Pfam Domains
(0, 0)
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all PFAM domains
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select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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Asym.Unit (281 KB)
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Header - Biol.Unit 1
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Header - Biol.Unit 2
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