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1BNP
Asym. Unit
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Asym.Unit (1.4 MB)
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Models
(55 )
Title
:
NMR SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF DNA POLYMERASE BETA, 55 STRUCTURES
Authors
:
D. -J. Liu, R. Prasad, S. H. Wilson, E. F. Derose, G. P. Mullen
Date
:
25 Apr 96 (Deposition) - 07 Dec 96 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (55 x)
Keywords
:
N-Terminal Domain, Dna Polymerase Beta, Single-Stranded Dna- Binding, Nucleotidyltransferase, Nucleotidyltransferase (Dna-Binding)
(Keyword Search:
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Reference
:
D. Liu, R. Prasad, S. H. Wilson, E. F. Derose, G. P. Mullen
Three-Dimensional Solution Structure Of The N-Terminal Domain Of Dna Polymerase Beta And Mapping Of The Ssdna Interaction Interface.
Biochemistry V. 35 6188 1996
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
(4, 4)
Info
All Exons
Exon 1.1 (A:1-21)
Exon 1.2 (A:21-40)
Exon 1.3 (A:40-62)
Exon 1.4 (A:63-87)
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1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/1.4
5: Boundary 1.4/1.5
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000026039
1
ENSRNOE00000186777
chr16:
73864707-73864774
68
DPOLB_RAT
1-21
21
1
A:1-21
21
1.2
ENSRNOT00000026039
2
ENSRNOE00000185461
chr16:
73864965-73865022
58
DPOLB_RAT
21-40
20
1
A:21-40
20
1.3
ENSRNOT00000026039
3
ENSRNOE00000185504
chr16:
73867557-73867623
67
DPOLB_RAT
40-62
23
1
A:40-62
23
1.4
ENSRNOT00000026039
4
ENSRNOE00000185543
chr16:
73869319-73869393
75
DPOLB_RAT
63-87
25
1
A:63-87
25
1.5
ENSRNOT00000026039
5
ENSRNOE00000186057
chr16:
73870085-73870143
59
DPOLB_RAT
88-107
20
0
-
-
1.6
ENSRNOT00000026039
6
ENSRNOE00000185607
chr16:
73871161-73871210
50
DPOLB_RAT
107-124
18
0
-
-
1.7
ENSRNOT00000026039
7
ENSRNOE00000185647
chr16:
73873715-73873766
52
DPOLB_RAT
124-141
18
0
-
-
1.8
ENSRNOT00000026039
8
ENSRNOE00000186149
chr16:
73875864-73875918
55
DPOLB_RAT
141-159
19
0
-
-
1.9
ENSRNOT00000026039
9
ENSRNOE00000186214
chr16:
73876001-73876073
73
DPOLB_RAT
160-184
25
0
-
-
1.10
ENSRNOT00000026039
10
ENSRNOE00000185711
chr16:
73876683-73876753
71
DPOLB_RAT
184-207
24
0
-
-
1.11
ENSRNOT00000026039
11
ENSRNOE00000185748
chr16:
73878874-73878960
87
DPOLB_RAT
208-236
29
0
-
-
1.12
ENSRNOT00000026039
12
ENSRNOE00000185778
chr16:
73884550-73884614
65
DPOLB_RAT
237-258
22
0
-
-
1.13
ENSRNOT00000026039
13
ENSRNOE00000186274
chr16:
73885616-73885755
140
DPOLB_RAT
258-305
48
0
-
-
1.14
ENSRNOT00000026039
14
ENSRNOE00000235677
chr16:
73887775-73890113
2339
DPOLB_RAT
305-335
31
0
-
-
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SCOP Domains
(1, 1)
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All SCOP Domains
1a: SCOP_d1bnpa_ (A:)
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Protein Domains
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)
(
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Organisms
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)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
SAM domain-like
(639)
Superfamily
:
DNA polymerase beta, N-terminal domain-like
(205)
Family
:
DNA polymerase beta, N-terminal domain-like
(183)
Protein domain
:
DNA polymerase beta, N-terminal (8 kD)-domain
(156)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(15)
1a
d1bnpa_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1bnpA00 (A:1-87)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
DNA polymerase; domain 1
(617)
Homologous Superfamily
:
[code=1.10.150.110, no name defined]
(150)
Norway rat (Rattus norvegicus)
(6)
1a
1bnpA00
A:1-87
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Chain A
Asymmetric Unit 1
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