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1BIL
Asym. Unit
Info
Asym.Unit (115 KB)
Biol.Unit 1 (109 KB)
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(1)
Title
:
CRYSTALLOGRAPHIC STUDIES ON THE BINDING MODES OF P2-P3 BUTANEDIAMIDE RENIN INHIBITORS
Authors
:
L. Tong
Date
:
27 Sep 95 (Deposition) - 29 Jan 96 (Release) - 18 Jan 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Aspartic Proteinase, Aspartyl Protease, Cleavage On Pair Of Basic Residues, Disease Mutation, Disulfide Bond, Glycoprotein, Hydrolase, Membrane, Protease, Secreted, Zymogen, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Tong, S. Pav, D. Lamarre, B. Simoneau, P. Lavallee, G. Jung
Crystallographic Studies On The Binding Modes Of P2-P3 Butanediamide Renin Inhibitors.
J. Biol. Chem. V. 270 29520 1995
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: (2S)-2-[(2-AMINO-1,3-THIAZOL-4-YL)... (0IUa)
1b: (2S)-2-[(2-AMINO-1,3-THIAZOL-4-YL)... (0IUb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
0IU
2
Ligand/Ion
(2S)-2-[(2-AMINO-1,3-THIAZOL-4-YL)METHYL]-N~1~-[(1S,2R,3R)-1-(CYCLOHEXYLMETHYL)-2,3-DIHYDROXY-5-METHYLHEXYL]-N~4~-[2-(DIMETHYLAMINO)-2-OXOETHYL]-N~4~-[(1S)-1-PHENYLETHYL]BUTANEDIAMIDE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:32 , GLY A:34 , TYR A:75 , SER A:76 , THR A:77 , PRO A:111 , PHE A:117 , ASP A:215 , GLY A:217 , ALA A:218 , SER A:219 , TYR A:220 , SER A:222 , HIS A:287 , MET A:289 , ALA A:300 , HOH A:803 , HOH A:879
BINDING SITE FOR RESIDUE 0IU A 391
2
AC2
SOFTWARE
ASP B:32 , GLY B:34 , TYR B:75 , SER B:76 , THR B:77 , PRO B:111 , PHE B:117 , ASP B:215 , GLY B:217 , ALA B:218 , SER B:219 , TYR B:220 , SER B:222 , ILE B:291 , HOH B:887
BINDING SITE FOR RESIDUE 0IU B 391
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SAPs(SNPs)/Variants
(4, 8)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_035088 (D32N, chain A/B, )
2: VAR_029171 (Q86K, chain A/B, )
3: VAR_020376 (G144R, chain A/B, )
4: VAR_035087 (R157K, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_035088
D
104
N
RENI_HUMAN
Disease (RTD)
---
A/B
D
32
N
2
UniProt
VAR_029171
Q
160
K
RENI_HUMAN
Polymorphism
11571083
A/B
Q
86
K
3
UniProt
VAR_020376
G
217
R
RENI_HUMAN
Polymorphism
11571117
A/B
G
144
R
4
UniProt
VAR_035087
R
230
K
RENI_HUMAN
Disease (RTD)
---
A/B
R
157
K
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 6)
Info
All PROSITE Patterns/Profiles
1: PEPTIDASE_A1 (A:14-323,B:14-323)
2: ASP_PROTEASE (A:29-40,B:29-40|A:212-223,B:212-22...)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PEPTIDASE_A1
PS51767
Peptidase family A1 domain profile.
RENI_HUMAN
86-403
2
A:14-323
B:14-323
2
ASP_PROTEASE
PS00141
Eukaryotic and viral aspartyl proteases active site.
RENI_HUMAN
101-112
289-300
4
A:29-40
B:29-40
A:212-223
B:212-223
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Exons
(9, 18)
Info
All Exons
Exon 1.2 (A:-2-11 | B:-2-11)
Exon 1.3 (A:12-51 | B:12-51)
Exon 1.4 (A:51-90 | B:51-90)
Exon 1.5 (A:91-157 (gaps) | B:91-157 (gaps))
Exon 1.6 (A:157-160 | B:157-159)
Exon 1.7 (A:160-196 (gaps) | B:160D-196)
Exon 1.8 (A:196-244 (gaps) | B:196-244 (gaps...)
Exon 1.9 (A:245-277 | B:245-277)
Exon 1.10a (A:278-326 | B:278-326)
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All Exon Boundaries
01: Boundary 1.1b/1.2
02: Boundary 1.2/1.3
03: Boundary 1.3/1.4
04: Boundary 1.4/1.5
05: Boundary 1.5/1.6
06: Boundary 1.6/1.7
07: Boundary 1.7/1.8
08: Boundary 1.8/1.9
09: Boundary 1.9/1.10a
10: Boundary 1.10a/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000272190
1b
ENSE00001952423
chr1:
204135450-204135324
127
RENI_HUMAN
1-33
33
0
-
-
1.2
ENST00000272190
2
ENSE00000962217
chr1:
204131291-204131141
151
RENI_HUMAN
33-83
51
2
A:-2-11
B:-2-11
14
14
1.3
ENST00000272190
3
ENSE00000962218
chr1:
204130543-204130420
124
RENI_HUMAN
84-125
42
2
A:12-51
B:12-51
42
42
1.4
ENST00000272190
4
ENSE00001075102
chr1:
204129806-204129688
119
RENI_HUMAN
125-164
40
2
A:51-90
B:51-90
40
40
1.5
ENST00000272190
5
ENSE00001075100
chr1:
204128723-204128527
197
RENI_HUMAN
165-230
66
2
A:91-157 (gaps)
B:91-157 (gaps)
67
67
1.6
ENST00000272190
6
ENSE00001652153
chr1:
204126497-204126489
9
RENI_HUMAN
230-233
4
2
A:157-160
B:157-159
4
3
1.7
ENST00000272190
7
ENSE00000962221
chr1:
204125924-204125805
120
RENI_HUMAN
233-273
41
2
A:160-196 (gaps)
B:160D-196
41
37
1.8
ENST00000272190
8
ENSE00001306111
chr1:
204125447-204125306
142
RENI_HUMAN
273-320
48
2
A:196-244 (gaps)
B:196-244 (gaps)
49
49
1.9
ENST00000272190
9
ENSE00000962223
chr1:
204125046-204124948
99
RENI_HUMAN
321-353
33
2
A:245-277
B:245-277
33
33
1.10a
ENST00000272190
10a
ENSE00001947658
chr1:
204124305-204123947
359
RENI_HUMAN
354-406
53
2
A:278-326
B:278-326
53
53
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1bila_ (A:)
1b: SCOP_d1bilb_ (B:)
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(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Acid proteases
(1120)
Superfamily
:
Acid proteases
(1120)
Family
:
Pepsin-like
(505)
Protein domain
:
Chymosin (synonym: renin)
(67)
Human (Homo sapiens) [TaxId: 9606]
(60)
1a
d1bila_
A:
1b
d1bilb_
B:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1bilA02 (A:171-325)
1b: CATH_1bilB02 (B:171-325)
1c: CATH_1bilB01 (B:1-170)
1d: CATH_1bilA01 (A:1-170)
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)
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)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Cathepsin D, subunit A; domain 1
(745)
Homologous Superfamily
:
Acid Proteases
(745)
Human (Homo sapiens)
(161)
1a
1bilA02
A:171-325
1b
1bilB02
B:171-325
1c
1bilB01
B:1-170
1d
1bilA01
A:1-170
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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