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1BI8
Biol. Unit 1
Info
Asym.Unit (138 KB)
Biol.Unit 1 (133 KB)
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(1)
Title
:
MECHANISM OF G1 CYCLIN DEPENDENT KINASE INHIBITION FROM THE STRUCTURES CDK6-P19INK4D INHIBITOR COMPLEX
Authors
:
A. A. Russo, L. Tong, J. O. Lee, P. D. Jeffrey, N. P. Pavletich
Date
:
22 Jun 98 (Deposition) - 13 Jan 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Cyclin Dependent Kinase, Cyclin Dependent Kinase Inhibitory Protein, Cdk, Ink4, Cell Cycle, Complex (Kinase/Inhibitor)
(Keyword Search:
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Reference
:
A. A. Russo, L. Tong, J. O. Lee, P. D. Jeffrey, N. P. Pavletich
Structural Basis For Inhibition Of The Cyclin-Dependent Kinase Cdk6 By The Tumour Suppressor P16Ink4A.
Nature V. 395 237 1998
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(3, 6)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_041978 (D110N, chain A/C, )
2: VAR_072638 (A197T, chain A/C, )
3: VAR_041979 (P199L, chain A/C, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_041978
D
110
N
CDK6_HUMAN
Polymorphism
35654944
A/C
D
110
N
2
UniProt
VAR_072638
A
197
T
CDK6_HUMAN
Disease (MCPH12)
---
A/C
A
197
T
3
UniProt
VAR_041979
P
199
L
CDK6_HUMAN
Unclassified
---
A/C
P
199
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(4, 8)
Info
All PROSITE Patterns/Profiles
1: ANK_REP_REGION (B:7-158,D:7-158)
2: PROTEIN_KINASE_ATP (A:19-43,C:19-43)
3: ANK_REPEAT (B:73-105,D:73-105)
4: PROTEIN_KINASE_ST (A:141-153,C:141-153)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ANK_REP_REGION
PS50297
Ankyrin repeat region circular profile.
CDN2D_HUMAN
7-158
2
B:7-158
D:7-158
2
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
CDK6_HUMAN
19-43
2
A:19-43
C:19-43
3
ANK_REPEAT
PS50088
Ankyrin repeat profile.
CDN2D_HUMAN
73-105
2
B:73-105
D:73-105
4
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
CDK6_HUMAN
141-153
2
A:141-153
C:141-153
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Exons
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SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1bi8b_ (B:)
1b: SCOP_d1bi8d_ (D:)
2a: SCOP_d1bi8a_ (A:)
2b: SCOP_d1bi8c_ (C:)
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Protein Domains
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(
)
Organisms
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)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-hairpin-alpha-hairpin repeat
(81)
Superfamily
:
Ankyrin repeat
(79)
Family
:
Ankyrin repeat
(60)
Protein domain
:
Cell cycle inhibitor p19ink4D
(3)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1bi8b_
B:
1b
d1bi8d_
D:
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
Cyclin-dependent PK, CDK6
(11)
Human (Homo sapiens) [TaxId: 9606]
(11)
2a
d1bi8a_
A:
2b
d1bi8c_
C:
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_1bi8A01 (A:11-102)
1b: CATH_1bi8C01 (C:11-102)
2a: CATH_1bi8B00 (B:6-160)
2b: CATH_1bi8D00 (D:6-160)
3a: CATH_1bi8A02 (A:103-299)
3b: CATH_1bi8C02 (C:103-299)
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)
Organisms
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)
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)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
1bi8A01
A:11-102
1b
1bi8C01
C:11-102
Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
(320)
Homologous Superfamily
:
[code=1.25.40.20, no name defined]
(65)
Human (Homo sapiens)
(31)
2a
1bi8B00
B:6-160
2b
1bi8D00
D:6-160
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
3a
1bi8A02
A:103-299
3b
1bi8C02
C:103-299
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (138 KB)
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