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Getting 'Biological Unit' information from database.
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Getting 'Exon' information from database.
1BH9
Asym. Unit
Info
Asym.Unit (28 KB)
Biol.Unit 1 (25 KB)
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(1)
Title
:
HTAFII18/HTAFII28 HETERODIMER CRYSTAL STRUCTURE WITH BOUND PCMBS
Authors
:
C. Birck, O. Poch, C. Romier, M. Ruff, G. Mengus, A. -C. Lavigne, I. Davidson, D. Moras
Date
:
16 Jun 98 (Deposition) - 22 Jun 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Htafii18, Histone Fold, Tata Binding Protein, Transcription Regulation Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Birck, O. Poch, C. Romier, M. Ruff, G. Mengus, A. C. Lavigne, I. Davidson, D. Moras
Human Taf(Ii)28 And Taf(Ii)18 Interact Through A Histone Fold Encoded By Atypical Evolutionary Conserved Motifs Also Found In The Spt3 Family.
Cell(Cambridge, Mass. ) V. 94 239 1998
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: PARA-MERCURY-BENZENESULFONIC ACID (PMBa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
PMB
1
Ligand/Ion
PARA-MERCURY-BENZENESULFONIC ACID
[
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: MRY (UNKNOWN)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA B:132 , ALA B:133 , ARG B:136 , LEU B:170 , CYS B:173 , GLU B:174 , GLU B:178 , MET B:179
BINDING SITE FOR RESIDUE PMB B 300
2
MRY
UNKNOWN
CYS B:173
BINDING SITE OF MERCURY FROM PCMBS.
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_052261 (S155F, chain B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_052261
S
155
F
TAF11_HUMAN
Polymorphism
11537996
B
S
155
F
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
Sorry, no Info available
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Exons
(6, 6)
Info
All Exons
Exon 1.2 (A:31-36)
Exon 1.3 (A:36-68)
Exon 1.4b (A:69-75)
Exon 2.3 (B:113-136)
Exon 2.4 (B:137-169)
Exon 2.5 (B:169-201)
View:
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All Exon Boundaries
1: Boundary 1.1a/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4b
4: Boundary 1.4b/-
5: Boundary 2.2/2.3
6: Boundary 2.3/2.4
7: Boundary 2.4/2.5
8: Boundary 2.5/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000338366
1a
ENSE00001451325
chr1:
109618624-109618543
82
TAF13_HUMAN
1-9
9
0
-
-
1.2
ENST00000338366
2
ENSE00001400407
chr1:
109617687-109617609
79
TAF13_HUMAN
10-36
27
1
A:31-36
6
1.3
ENST00000338366
3
ENSE00001791787
chr1:
109608854-109608757
98
TAF13_HUMAN
36-68
33
1
A:36-68
33
1.4b
ENST00000338366
4b
ENSE00001955982
chr1:
109607315-109606762
554
TAF13_HUMAN
69-124
56
1
A:69-75
7
2.1a
ENST00000361288
1a
ENSE00001853667
chr6:
34855866-34855564
303
TAF11_HUMAN
1-57
57
0
-
-
2.2
ENST00000361288
2
ENSE00000746232
chr6:
34850857-34850709
149
TAF11_HUMAN
58-107
50
0
-
-
2.3
ENST00000361288
3
ENSE00001383789
chr6:
34848153-34848066
88
TAF11_HUMAN
107-136
30
1
B:113-136
24
2.4
ENST00000361288
4
ENSE00000746323
chr6:
34847840-34847744
97
TAF11_HUMAN
137-169
33
1
B:137-169
33
2.5
ENST00000361288
5
ENSE00002151542
chr6:
34846497-34845555
943
TAF11_HUMAN
169-211
43
1
B:169-201
33
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1bh9a_ (A:)
2a: SCOP_d1bh9b_ (B:)
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(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Histone-fold
(277)
Superfamily
:
Histone-fold
(277)
Family
:
TBP-associated factors, TAFs
(19)
Protein domain
:
TAF(II)18
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1bh9a_
A:
Protein domain
:
TAF(II)28
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
2a
d1bh9b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1bh9B00 (B:113-201)
1b: CATH_1bh9A00 (A:31-75)
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Organisms
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)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Histone, subunit A
(62)
Homologous Superfamily
:
Histone, subunit A
(62)
Human (Homo sapiens)
(28)
1a
1bh9B00
B:113-201
1b
1bh9A00
A:31-75
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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