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1B5P
Asym. Unit
Info
Asym.Unit (131 KB)
Biol.Unit 1 (126 KB)
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(1)
Title
:
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE DOUBLE MUTANT 1
Authors
:
H. Ura, T. Nakai, S. I. Kawaguchi, I. Miyahara, K. Hirotsu, S. Kuramitsu
Date
:
07 Jan 99 (Deposition) - 02 Sep 03 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Aminotransferase, Pyridoxal Enzyme, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Ura, T. Nakai, S. I. Kawaguchi, I. Miyahara, K. Hirotsu, S. Kuramits
Substrate Recognition Mechanism Of Thermophilic Dual-Substrate Enzyme
J. Biochem. (Tokyo) V. 130 89 2001
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: PYRIDOXAL-5'-PHOSPHATE (PLPa)
1b: PYRIDOXAL-5'-PHOSPHATE (PLPb)
2a: PHOSPHATE ION (PO4a)
2b: PHOSPHATE ION (PO4b)
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Label:
No.
Name
Count
Type
Full Name
1
PLP
2
Ligand/Ion
PYRIDOXAL-5'-PHOSPHATE
2
PO4
2
Ligand/Ion
PHOSPHATE ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:39 , TRP A:125 , ASN A:175 , TYR A:322 , ARG A:361 , HOH A:603
BINDING SITE FOR RESIDUE PO4 A 414
2
AC2
SOFTWARE
GLY B:39 , TRP B:125 , ASN B:175 , TYR B:322 , ARG B:361 , HOH B:1582 , HOH B:1597 , HOH B:1655
BINDING SITE FOR RESIDUE PO4 B 414
3
AC3
SOFTWARE
GLY A:99 , GLY A:100 , SER A:101 , TRP A:125 , ASN A:171 , ASN A:175 , ASP A:203 , ILE A:205 , TYR A:206 , ALA A:233 , LYS A:234 , ARG A:242 , HOH A:518 , TYR B:64
BINDING SITE FOR RESIDUE PLP A 413
4
AC4
SOFTWARE
TYR A:64 , GLY B:99 , GLY B:100 , SER B:101 , TRP B:125 , ASN B:171 , ASN B:175 , ASP B:203 , ILE B:205 , TYR B:206 , ALA B:233 , LYS B:234 , ARG B:242 , HOH B:1518 , HOH B:1597
BINDING SITE FOR RESIDUE PLP B 413
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: AA_TRANSFER_CLASS_1 (A:231-244,B:231-244)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
AA_TRANSFER_CLASS_1
PS00105
Aminotransferases class-I pyridoxal-phosphate attachment site.
AAT_THET8
231-244
2
A:231-244
B:231-244
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1b5pa_ (A:)
1b: SCOP_d1b5pb_ (B:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
PLP-dependent transferase-like
(627)
Superfamily
:
PLP-dependent transferases
(625)
Family
:
AAT-like
(184)
Protein domain
:
Aspartate aminotransferase, AAT
(112)
Thermus thermophilus [TaxId: 274]
(9)
1a
d1b5pa_
A:
1b
d1b5pb_
B:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1b5pA02 (A:63-281)
1b: CATH_1b5pB02 (B:63-281)
2a: CATH_1b5pA01 (A:1-62,A:282-381)
2b: CATH_1b5pB01 (B:1-62,B:282-381)
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Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Aspartate Aminotransferase; domain 2
(384)
Homologous Superfamily
:
Type I PLP-dependent aspartate aminotransferase-like (Major domain)
(384)
Thermus thermophilus hb8. Organism_taxid: 300852. Strain: hb8.
(11)
1a
1b5pA02
A:63-281
1b
1b5pB02
B:63-281
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Aspartate Aminotransferase, domain 1
(355)
Homologous Superfamily
:
Aspartate Aminotransferase, domain 1
(354)
Thermus thermophilus hb8. Organism_taxid: 300852. Strain: hb8.
(9)
2a
1b5pA01
A:1-62,A:282-381
2b
1b5pB01
B:1-62,B:282-381
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (131 KB)
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