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1B3A
Biol. Unit 2
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Asym.Unit (33 KB)
Biol.Unit 1 (16 KB)
Biol.Unit 2 (15 KB)
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(1)
Title
:
TOTAL CHEMICAL SYNTHESIS AND HIGH-RESOLUTION CRYSTAL STRUCTURE OF THE POTENT ANTI-HIV PROTEIN AOP-RANTES
Authors
:
J. Wilken, D. Hoover, D. A. Thompson, P. N. Barlow, H. Mcsparron, L. Picard, A. Wlodawer, J. Lubkowski, S. B. H. Kent
Date
:
07 Dec 98 (Deposition) - 23 Apr 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Chemical Protein Synthesis, Chemokine, Crystal Structure, Hiv-1, Rantes, Anti-Hiv Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Wilken, D. Hoover, D. A. Thompson, P. N. Barlow, H. Mcsparron, L. Picard, A. Wlodawer, J. Lubkowski, S. B. Kent
Total Chemical Synthesis And High-Resolution Crystal Structure Of The Potent Anti-Hiv Protein Aop-Rantes.
Chem. Biol. V. 6 43 1999
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: PENTYLOXYAMINO-ACETALDEHYDE (AOPa)
1b: PENTYLOXYAMINO-ACETALDEHYDE (AOPb)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
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No.
Name
Count
Type
Full Name
1
AOP
1
Ligand/Ion
PENTYLOXYAMINO-ACETALDEHYDE
2
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PRO A:9 , PHE A:28 , GLN A:48 , HOH A:1085 , HOH A:1091 , ALA B:22 , ILE B:24
BINDING SITE FOR RESIDUE SO4 A 197
2
AC2
SOFTWARE
HIS A:23 , THR A:43 , ARG A:44 , LYS A:45 , ARG A:47 , SER A:68 , HOH A:1122 , HOH B:1130
BINDING SITE FOR RESIDUE SO4 A 196
3
AC3
SOFTWARE
SER A:31 , GLY A:32 , HOH A:1100 , HOH A:1129 , HOH A:1160 , HOH A:1161 , HOH A:1169 , SER B:31 , GLY B:32
BINDING SITE FOR RESIDUE SO4 A 198
4
AC4
SOFTWARE
HIS B:23 , THR B:43 , ARG B:44 , LYS B:45 , ARG B:47 , SER B:68 , HOH B:1066
BINDING SITE FOR RESIDUE SO4 B 199
5
AC5
SOFTWARE
PRO A:2 , TYR A:3 , HOH A:1034 , CYS B:11 , PHE B:12 , ALA B:13 , TYR B:14 , ASN B:36
BINDING SITE FOR RESIDUE AOP A 1
6
AC6
SOFTWARE
PHE A:12 , TYR A:14 , HIS A:23 , HOH A:1124 , HOH A:1206 , PRO B:2 , HOH B:1130
BINDING SITE FOR RESIDUE AOP B 1
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: SMALL_CYTOKINES_CC (B:10-51)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SMALL_CYTOKINES_CC
PS00472
Small cytokines (intercrine/chemokine) C-C subfamily signature.
CCL5_HUMAN
33-74
1
-
B:10-51
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Exons
(0, 0)
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1b3aa_ (A:)
1b: SCOP_d1b3ab_ (B:)
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(
)
(
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)
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)
(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
IL8-like
(118)
Superfamily
:
Interleukin 8-like chemokines
(117)
Family
:
Interleukin 8-like chemokines
(113)
Protein domain
:
RANTES (regulated upon activation, normal T-cell expressed and secreted)
(10)
Human (Homo sapiens) [TaxId: 9606]
(10)
1a
d1b3aa_
A:
1b
d1b3ab_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1b3aA00 (A:2-68)
1b: CATH_1b3aB00 (B:2-68)
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)
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)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
OB fold (Dihydrolipoamide Acetyltransferase, E2P)
(1040)
Homologous Superfamily
:
[code=2.40.50.40, no name defined]
(161)
[unclassified]
(41)
1a
1b3aA00
A:2-68
1b
1b3aB00
B:2-68
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Pfam Domains
(0, 0)
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Chain B
Asymmetric Unit 1
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Asym.Unit (33 KB)
Header - Asym.Unit
Biol.Unit 1 (16 KB)
Header - Biol.Unit 1
Biol.Unit 2 (15 KB)
Header - Biol.Unit 2
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