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1B22
Asym. Unit
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Asym.Unit (539 KB)
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Models
(30 )
Title
:
RAD51 (N-TERMINAL DOMAIN)
Authors
:
H. Aihara, Y. Ito, H. Kurumizaka, S. Yokoyama, T. Shibata, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
04 Dec 98 (Deposition) - 03 Dec 99 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (30 x)
Keywords
:
Dna Binding, Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Genomics, Dna Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Aihara, Y. Ito, H. Kurumizaka, S. Yokoyama, T. Shibata
The N-Terminal Domain Of The Human Rad51 Protein Binds Dna: Structure And A Dna Binding Surface As Revealed By Nmr.
J. Mol. Biol. V. 290 495 1999
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(3, 3)
Info
All Exons
Exon 1.4b (A:16-29)
Exon 1.5b (A:30-75)
Exon 1.7 (A:76-85)
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All Exon Boundaries
1: Boundary 1.2b/1.4b
2: Boundary 1.4b/1.5b
3: Boundary 1.5b/1.7
4: Boundary 1.7/1.8
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2b
ENST00000267868
2b
ENSE00001845063
chr15:
40987358-40987623
266
RAD51_HUMAN
-
0
0
-
-
1.4b
ENST00000267868
4b
ENSE00001100140
chr15:
40990955-40991043
89
RAD51_HUMAN
1-29
29
1
A:16-29
14
1.5b
ENST00000267868
5b
ENSE00002189671
chr15:
40993262-40993399
138
RAD51_HUMAN
30-75
46
1
A:30-75
46
1.7
ENST00000267868
7
ENSE00000675584
chr15:
40998375-40998492
118
RAD51_HUMAN
76-115
40
1
A:76-85
10
1.8
ENST00000267868
8
ENSE00000675585
chr15:
41001223-41001314
92
RAD51_HUMAN
115-145
31
0
-
-
1.10c
ENST00000267868
10c
ENSE00000675586
chr15:
41011003-41011097
95
RAD51_HUMAN
146-177
32
0
-
-
1.11a
ENST00000267868
11a
ENSE00000675587
chr15:
41020909-41021022
114
RAD51_HUMAN
177-215
39
0
-
-
1.12a
ENST00000267868
12a
ENSE00001221254
chr15:
41021703-41021832
130
RAD51_HUMAN
215-258
44
0
-
-
1.13
ENST00000267868
13
ENSE00000675589
chr15:
41022051-41022172
122
RAD51_HUMAN
259-299
41
0
-
-
1.14f
ENST00000267868
14f
ENSE00001875782
chr15:
41023253-41024354
1102
RAD51_HUMAN
299-339
41
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1b22a_ (A:)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
SAM domain-like
(639)
Superfamily
:
Rad51 N-terminal domain-like
(25)
Family
:
DNA repair protein Rad51, N-terminal domain
(16)
Protein domain
:
DNA repair protein Rad51, N-terminal domain
(16)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1b22a_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1b22A00 (A:16-85)
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Organisms
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)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
DNA polymerase; domain 1
(617)
Homologous Superfamily
:
5' to 3' exonuclease, C-terminal subdomain
(384)
Human (Homo sapiens)
(34)
1a
1b22A00
A:16-85
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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