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Getting 'Exon' information from database.
1AXN
Asym. Unit
Info
Asym.Unit (63 KB)
Biol.Unit 1 (58 KB)
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(1)
Title
:
THE HIGH RESOLUTION STRUCTURE OF ANNEXIN III SHOWS DIFFERENCES WITH ANNEXIN V
Authors
:
B. Favier-Perron, A. Lewit-Bentley, F. Russo-Marie
Date
:
21 Aug 95 (Deposition) - 08 Mar 96 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.78
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Annexin Family, Calcium/Phospholipid-Binding Protein Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Favier-Perron, A. Lewit-Bentley, F. Russo-Marie
The High-Resolution Crystal Structure Of Human Annexin Iii Shows Subtle Differences With Annexin V.
Biochemistry V. 35 1740 1996
(for further references see the
PDB file header
)
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Hetero Components
(1, 5)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
5
Ligand/Ion
CALCIUM ION
[
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ILE A:32 , GLY A:34 , GLY A:36 , THR A:37 , ASP A:76
BINDING SITE FOR RESIDUE CA A 351
2
AC2
SOFTWARE
MET A:104 , GLY A:106 , GLY A:108 , THR A:109 , GLU A:148
BINDING SITE FOR RESIDUE CA A 352
3
AC3
SOFTWARE
GLY A:187 , ARG A:190 , GLY A:192 , GLU A:232 , HOH A:406 , HOH A:407
BINDING SITE FOR RESIDUE CA A 353
4
AC4
SOFTWARE
LYS A:230 , LEU A:233 , GLU A:238 , HOH A:580
BINDING SITE FOR RESIDUE CA A 354
5
AC5
SOFTWARE
THR A:193 , GLU A:195 , HOH A:458 , HOH A:603
BINDING SITE FOR RESIDUE CA A 355
[
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SAPs(SNPs)/Variants
(4, 4)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_013914 (S20N, chain A, )
2: VAR_013915 (I220N, chain A, )
3: VAR_013916 (P252L, chain A, )
4: VAR_013917 (F292S, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_013914
S
19
N
ANXA3_HUMAN
Polymorphism
5951
A
S
20
N
2
UniProt
VAR_013915
I
219
N
ANXA3_HUMAN
Polymorphism
5948
A
I
220
N
3
UniProt
VAR_013916
P
251
L
ANXA3_HUMAN
Polymorphism
5949
A
P
252
L
4
UniProt
VAR_013917
F
291
S
ANXA3_HUMAN
Polymorphism
5941
A
F
292
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: ANNEXIN (A:36-88|A:108-160|A:192-244|A:267-...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ANNEXIN
PS00223
Annexins repeated domain signature.
ANXA3_HUMAN
35-87
107-159
191-243
266-318
4
A:36-88
A:108-160
A:192-244
A:267-319
[
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Exons
(12, 12)
Info
All Exons
Exon 1.4 (A:2-6)
Exon 1.6 (A:7-36)
Exon 1.7 (A:36-67)
Exon 1.8a (A:68-105)
Exon 1.9 (A:106-136)
Exon 1.10b (A:136-162)
Exon 1.11 (A:163-181)
Exon 1.12 (A:182-213)
Exon 1.13b (A:213-245)
Exon 1.14 (A:245-264)
Exon 1.15b (A:265-305)
Exon 1.16d (A:306-324)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.1a/1.4
02: Boundary 1.4/1.6
03: Boundary 1.6/1.7
04: Boundary 1.7/1.8a
05: Boundary 1.8a/1.9
06: Boundary 1.9/1.10b
07: Boundary 1.10b/1.11
08: Boundary 1.11/1.12
09: Boundary 1.12/1.13b
10: Boundary 1.13b/1.14
11: Boundary 1.14/1.15b
12: Boundary 1.15b/1.16d
13: Boundary 1.16d/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000264908
1a
ENSE00001522300
chr4:
79472673-79473013
341
ANXA3_HUMAN
-
0
0
-
-
1.4
ENST00000264908
4
ENSE00002149040
chr4:
79475590-79475642
53
ANXA3_HUMAN
1-5
5
1
A:2-6
5
1.6
ENST00000264908
6
ENSE00001126555
chr4:
79494334-79494421
88
ANXA3_HUMAN
6-35
30
1
A:7-36
30
1.7
ENST00000264908
7
ENSE00000428996
chr4:
79500181-79500275
95
ANXA3_HUMAN
35-66
32
1
A:36-67
32
1.8a
ENST00000264908
8a
ENSE00000726115
chr4:
79503331-79503444
114
ANXA3_HUMAN
67-104
38
1
A:68-105
38
1.9
ENST00000264908
9
ENSE00002196569
chr4:
79507414-79507504
91
ANXA3_HUMAN
105-135
31
1
A:106-136
31
1.10b
ENST00000264908
10b
ENSE00000935674
chr4:
79512698-79512777
80
ANXA3_HUMAN
135-161
27
1
A:136-162
27
1.11
ENST00000264908
11
ENSE00000935675
chr4:
79516535-79516591
57
ANXA3_HUMAN
162-180
19
1
A:163-181
19
1.12
ENST00000264908
12
ENSE00002185654
chr4:
79516948-79517041
94
ANXA3_HUMAN
181-212
32
1
A:182-213
32
1.13b
ENST00000264908
13b
ENSE00000726142
chr4:
79518473-79518568
96
ANXA3_HUMAN
212-244
33
1
A:213-245
33
1.14
ENST00000264908
14
ENSE00001025502
chr4:
79522664-79522722
59
ANXA3_HUMAN
244-263
20
1
A:245-264
20
1.15b
ENST00000264908
15b
ENSE00001139786
chr4:
79525431-79525553
123
ANXA3_HUMAN
264-304
41
1
A:265-305
41
1.16d
ENST00000264908
16d
ENSE00002057276
chr4:
79531210-79531575
366
ANXA3_HUMAN
305-323
19
1
A:306-324
19
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1axna_ (A:)
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Classes
(
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(
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Annexin
(61)
Superfamily
:
Annexin
(61)
Family
:
Annexin
(56)
Protein domain
:
Annexin III
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1axna_
A:
[
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1axnA01 (A:18-90)
1b: CATH_1axnA03 (A:165-250)
1c: CATH_1axnA04 (A:251-322)
1d: CATH_1axnA02 (A:91-164)
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Topologies
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Annexin V; domain 1
(80)
Homologous Superfamily
:
[code=1.10.220.10, no name defined]
(58)
Human (Homo sapiens)
(22)
1a
1axnA01
A:18-90
1b
1axnA03
A:165-250
1c
1axnA04
A:251-322
1d
1axnA02
A:91-164
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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