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1AV1
Asym. Unit
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Asym.Unit (120 KB)
Biol.Unit 1 (115 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN APOLIPOPROTEIN A-I
Authors
:
D. W. Borhani, D. P. Rogers, J. A. Engler, C. G. Brouillette
Date
:
23 Sep 97 (Deposition) - 04 Feb 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
4.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Lipoprotein, Lipid Transport, Cholesterol Metabolism, Atherosclerosis, Hdl, Lcat-Activation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. W. Borhani, D. P. Rogers, J. A. Engler, C. G. Brouillette
Crystal Structure Of Truncated Human Apolipoprotein A-I Suggests A Lipid-Bound Conformation.
Proc. Natl. Acad. Sci. Usa V. 94 12291 1997
(for further references see the
PDB file header
)
[
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Label:
Sorry, no Info available
[
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]
Sites
(0, 0)
Info
All Sites
View:
Select:
Label:
Sorry, no Info available
[
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]
SAPs(SNPs)/Variants
(19, 76)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_000610 (L60R, chain A/B/C/D, )
02: VAR_017017 (T68I, chain A/B/C/D, )
03: VAR_000611 (D89E, chain A/B/C/D, )
04: VAR_000612 (A95D, chain A/B/C/D, )
05: VAR_016189 (D102H, chain A/B/C/D, )
06: VAR_000613 (D103N, chain A/B/C/D, )
07: VAR_000615 (K107M, chain A/B/C/D, )
08: VAR_000616 (W108R, chain A/B/C/D, )
09: VAR_000617 (E110K, chain A/B/C/D, )
10: VAR_000618 (E136K, chain A/B/C/D, )
11: VAR_000619 (E139G, chain A/B/C/D, )
12: VAR_000620 (P143R, chain A/B/C/D, )
13: VAR_000621 (L144R, chain A/B/C/D, )
14: VAR_000622 (E147V, chain A/B/C/D, )
15: VAR_021362 (V156E, chain A/B/C/D, )
16: VAR_014609 (R160P, chain A/B/C/D, )
17: VAR_000623 (P165R, chain A/B/C/D, )
18: VAR_000624 (R173C, chain A/B/C/D, )
19: VAR_000625 (E198K, chain A/B/C/D, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_000610
L
84
R
APOA1_HUMAN
Disease (AMYL8)
---
A/B/C/D
L
60
R
02
UniProt
VAR_017017
T
92
I
APOA1_HUMAN
Polymorphism
---
A/B/C/D
T
68
I
03
UniProt
VAR_000611
D
113
E
APOA1_HUMAN
Polymorphism
---
A/B/C/D
D
89
E
04
UniProt
VAR_000612
A
119
D
APOA1_HUMAN
Unclassified
---
A/B/C/D
A
95
D
05
UniProt
VAR_016189
D
126
H
APOA1_HUMAN
Polymorphism
5077
A/B/C/D
D
102
H
06
UniProt
VAR_000613
D
127
N
APOA1_HUMAN
Unclassified
---
A/B/C/D
D
103
N
07
UniProt
VAR_000615
K
131
M
APOA1_HUMAN
Polymorphism
4882
A/B/C/D
K
107
M
08
UniProt
VAR_000616
W
132
R
APOA1_HUMAN
Unclassified
---
A/B/C/D
W
108
R
09
UniProt
VAR_000617
E
134
K
APOA1_HUMAN
Unclassified
---
A/B/C/D
E
110
K
10
UniProt
VAR_000618
E
160
K
APOA1_HUMAN
Unclassified
---
A/B/C/D
E
136
K
11
UniProt
VAR_000619
E
163
G
APOA1_HUMAN
Polymorphism
---
A/B/C/D
E
139
G
12
UniProt
VAR_000620
P
167
R
APOA1_HUMAN
Unclassified
---
A/B/C/D
P
143
R
13
UniProt
VAR_000621
L
168
R
APOA1_HUMAN
Unclassified
---
A/B/C/D
L
144
R
14
UniProt
VAR_000622
E
171
V
APOA1_HUMAN
Polymorphism
---
A/B/C/D
E
147
V
15
UniProt
VAR_021362
V
180
E
APOA1_HUMAN
Unclassified
---
A/B/C/D
V
156
E
16
UniProt
VAR_014609
R
184
P
APOA1_HUMAN
Polymorphism
5078
A/B/C/D
R
160
P
17
UniProt
VAR_000623
P
189
R
APOA1_HUMAN
Polymorphism
---
A/B/C/D
P
165
R
18
UniProt
VAR_000624
R
197
C
APOA1_HUMAN
Polymorphism
28931573
A/B/C/D
R
173
C
19
UniProt
VAR_000625
E
222
K
APOA1_HUMAN
Unclassified
---
A/B/C/D
E
198
K
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
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;
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Exons
(2, 8)
Info
All Exons
Exon 1.2 (A:43-43 | B:43-43 | C:43-43 | D:43...)
Exon 1.3 (A:43-243 | B:43-243 | C:43-243 | D...)
View:
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All Exon Boundaries
1: Boundary 1.1b/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000375323
1b
ENSE00001466703
chr11:
116708330-116708061
270
APOA1_HUMAN
1-15
15
0
-
-
1.2
ENST00000375323
2
ENSE00000795784
chr11:
116707873-116707717
157
APOA1_HUMAN
15-67
53
4
A:43-43
B:43-43
C:43-43
D:43-43
1
1
1
1
1.3
ENST00000375323
3
ENSE00001411471
chr11:
116707127-116706467
661
APOA1_HUMAN
67-267
201
4
A:43-243
B:43-243
C:43-243
D:43-243
201
201
201
201
[
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]
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1av1a_ (A:)
1b: SCOP_d1av1b_ (B:)
1c: SCOP_d1av1c_ (C:)
1d: SCOP_d1av1d_ (D:)
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Protein Domains
(
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(
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Organisms
(
)
(
)
Class
:
Coiled coil proteins
(689)
Fold
:
Apolipoprotein A-I
(1)
Superfamily
:
Apolipoprotein A-I
(1)
Family
:
Apolipoprotein A-I
(1)
Protein domain
:
Apolipoprotein A-I
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1av1a_
A:
1b
d1av1b_
B:
1c
d1av1c_
C:
1d
d1av1d_
D:
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CATH Domains
(0, 0)
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Pfam Domains
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Chain D
Asymmetric Unit 1
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Asym.Unit (120 KB)
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