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1ASJ
Asym. Unit
Info
Asym.Unit (153 KB)
Biol.Unit 1, α-C (8.4 MB)
Biol.Unit 1 (8.4 MB)
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(1)
Title
:
P1/MAHONEY POLIOVIRUS, AT CRYOGENIC TEMPERATURE
Authors
:
M. W. Wien, S. Curry, D. J. Filman, J. M. Hogle
Date
:
11 Aug 97 (Deposition) - 03 Dec 97 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : 0,1,2,3,4
Biol. Unit 1: 0,1,2,3,4 (60x)
Keywords
:
Picornavirus, Poliovirus, Coat Protein, Icosahedral Virus, Virus
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. W. Wien, S. Curry, D. J. Filman, J. M. Hogle
Structural Studies Of Poliovirus Mutants That Overcome Receptor Defects.
Nat. Struct. Biol. V. 4 666 1997
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: MYRISTIC ACID (MYRa)
2a: SPHINGOSINE (SPHa)
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No.
Name
Count
Type
Full Name
1
MYR
1
Ligand/Ion
MYRISTIC ACID
2
SPH
1
Ligand/Ion
SPHINGOSINE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY 0:6 , GLY 4:2 , ALA 4:3 , ILE 4:30 , TYR 4:32
BINDING SITE FOR RESIDUE MYR 4 1
2
AC2
SOFTWARE
TYR 1:112 , MET 1:132 , TYR 1:159 , VAL 1:199 , TYR 1:205 , SER 1:206 , PHE 1:237 , HOH 1:398
BINDING SITE FOR RESIDUE SPH 1 0
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1asj_1 (4:,2:)
1b: SCOP_d1asj1_ (1:)
1c: SCOP_d1asj3_ (3:)
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Protein Domains
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(
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Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Nucleoplasmin-like/VP (viral coat and capsid proteins)
(278)
Superfamily
:
Positive stranded ssRNA viruses
(163)
Family
:
Picornaviridae-like VP (VP1, VP2, VP3 and VP4)
(103)
Protein domain
:
Poliovirus coat proteins
(20)
Poliovirus type 1, strain Mahoney [TaxId: 12080]
(12)
1a
d1asj.1
4:,2:
1b
d1asj1_
1:
1c
d1asj3_
3:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1asj400 (4:2-69)
2a: CATH_1asj300 (3:1-235)
2b: CATH_1asj100 (1:20-302)
2c: CATH_1asj200 (2:5-272)
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)
Organisms
(
)
(
)
Class
:
Few Secondary Structures
(1120)
Architecture
:
Irregular
(1120)
Topology
:
Rhinovirus 14, subunit 4
(101)
Homologous Superfamily
:
Rhinovirus 14, subunit 4
(68)
Human poliovirus 1 mahoney. Organism_taxid: 12081. Strain: mahoney. Human poliovirus 1 mahoney. Organism_taxid: 12081. Strain: mahoney. Human poliovirus 1 mahoney. Organism_taxid: 12081. Strain: mahoney. Humanpoliovirus 1 mahoney. Organism_taxid: 12081. Strain: mahoney.
(6)
1a
1asj400
4:2-69
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.20, no name defined]
(133)
Human poliovirus 1 mahoney. Organism_taxid: 12081. Strain: mahoney. Human poliovirus 1 mahoney. Organism_taxid: 12081. Strain: mahoney. Human poliovirus 1 mahoney. Organism_taxid: 12081. Strain: mahoney. Humanpoliovirus 1 mahoney. Organism_taxid: 12081. Strain: mahoney.
(6)
2a
1asj300
3:1-235
2b
1asj100
1:20-302
2c
1asj200
2:5-272
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Pfam Domains
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Asym.Unit (153 KB)
Header - Asym.Unit
Biol.Unit 1 (8.4 MB)
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