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1ANW
Asym. Unit
Info
Asym.Unit (112 KB)
Biol.Unit 1 (55 KB)
Biol.Unit 2 (55 KB)
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(1)
Title
:
THE EFFECT OF METAL BINDING ON THE STRUCTURE OF ANNEXIN V AND IMPLICATIONS FOR MEMBRANE BINDING
Authors
:
A. Lewit-Bentley, S. Morera, R. Huber, G. Bodo
Date
:
26 Oct 93 (Deposition) - 20 Dec 94 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Calcium/Phospholipid-Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Lewit-Bentley, S. Morera, R. Huber, G. Bodo
The Effect Of Metal Binding On The Structure Of Annexin V And Implications For Membrane Binding.
Eur. J. Biochem. V. 210 73 1992
(for further references see the
PDB file header
)
[
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
4
Ligand/Ion
CALCIUM ION
[
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
MET A:28 , GLY A:30 , GLY A:32 , GLU A:72 , HOH A:823
BINDING SITE FOR RESIDUE CA A 351
2
AC2
SOFTWARE
MET A:259 , GLY A:261 , GLY A:263 , ASP A:303 , HOH A:902 , HOH A:981
BINDING SITE FOR RESIDUE CA A 352
3
AC3
SOFTWARE
MET B:28 , GLY B:30 , GLY B:32 , GLU B:72 , HOH B:757 , HOH B:861
BINDING SITE FOR RESIDUE CA B 353
4
AC4
SOFTWARE
MET B:259 , GLY B:261 , GLY B:263 , ASP B:303 , HOH B:891
BINDING SITE FOR RESIDUE CA B 354
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 8)
Info
All PROSITE Patterns/Profiles
1: ANNEXIN (A:32-84,B:32-84|A:104-156,B:104-15...)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ANNEXIN
PS00223
Annexins repeated domain signature.
ANXA5_HUMAN
32-84
104-156
188-240
263-315
8
A:32-84
B:32-84
A:104-156
B:104-156
A:188-240
B:188-240
A:263-315
B:263-315
[
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Exons
(12, 24)
Info
All Exons
Exon 1.1h (A:2-3 | B:2-3)
Exon 1.2 (A:4-32 | B:4-32)
Exon 1.3 (A:32-63 | B:32-63)
Exon 1.4 (A:64-101 | B:64-101)
Exon 1.5a (A:102-132 | B:102-132)
Exon 1.6b (A:132-158 | B:132-158)
Exon 1.7b (A:159-177 | B:159-177)
Exon 1.8a (A:178-209 | B:178-209)
Exon 1.9b (A:209-241 | B:209-241)
Exon 1.10b (A:241-260 | B:241-260)
Exon 1.11a (A:261-301 | B:261-301)
Exon 1.12e (A:302-320 | B:302-320)
View:
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All Exon Boundaries
01: Boundary 1.1a/1.1h
02: Boundary 1.1h/1.2
03: Boundary 1.2/1.3
04: Boundary 1.3/1.4
05: Boundary 1.4/1.5a
06: Boundary 1.5a/1.6b
07: Boundary 1.6b/1.7b
08: Boundary 1.7b/1.8a
09: Boundary 1.8a/1.9b
10: Boundary 1.9b/1.10b
11: Boundary 1.10b/1.11a
12: Boundary 1.11a/1.12e
13: Boundary 1.12e/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000296511
1a
ENSE00001377438
chr4:
122618268-122618018
251
ANXA5_HUMAN
-
0
0
-
-
1.1h
ENST00000296511
1h
ENSE00002184696
chr4:
122617779-122617736
44
ANXA5_HUMAN
1-3
3
2
A:2-3
B:2-3
2
2
1.2
ENST00000296511
2
ENSE00001081540
chr4:
122607527-122607443
85
ANXA5_HUMAN
4-32
29
2
A:4-32
B:4-32
29
29
1.3
ENST00000296511
3
ENSE00001328124
chr4:
122605926-122605832
95
ANXA5_HUMAN
32-63
32
2
A:32-63
B:32-63
32
32
1.4
ENST00000296511
4
ENSE00001081539
chr4:
122604632-122604519
114
ANXA5_HUMAN
64-101
38
2
A:64-101
B:64-101
38
38
1.5a
ENST00000296511
5a
ENSE00001081537
chr4:
122602916-122602826
91
ANXA5_HUMAN
102-132
31
2
A:102-132
B:102-132
31
31
1.6b
ENST00000296511
6b
ENSE00001081538
chr4:
122599649-122599570
80
ANXA5_HUMAN
132-158
27
2
A:132-158
B:132-158
27
27
1.7b
ENST00000296511
7b
ENSE00001081532
chr4:
122599105-122599049
57
ANXA5_HUMAN
159-177
19
2
A:159-177
B:159-177
19
19
1.8a
ENST00000296511
8a
ENSE00001081535
chr4:
122593781-122593688
94
ANXA5_HUMAN
178-209
32
2
A:178-209
B:178-209
32
32
1.9b
ENST00000296511
9b
ENSE00001081541
chr4:
122592797-122592702
96
ANXA5_HUMAN
209-241
33
2
A:209-241
B:209-241
33
33
1.10b
ENST00000296511
10b
ENSE00001081542
chr4:
122591167-122591109
59
ANXA5_HUMAN
241-260
20
2
A:241-260
B:241-260
20
20
1.11a
ENST00000296511
11a
ENSE00001081533
chr4:
122590879-122590757
123
ANXA5_HUMAN
261-301
41
2
A:261-301
B:261-301
41
41
1.12e
ENST00000296511
12e
ENSE00001866494
chr4:
122589682-122589110
573
ANXA5_HUMAN
302-320
19
2
A:302-320
B:302-320
19
19
[
close EXON info
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1anwa_ (A:)
1b: SCOP_d1anwb_ (B:)
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(
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Class
:
All alpha proteins
(14657)
Fold
:
Annexin
(61)
Superfamily
:
Annexin
(61)
Family
:
Annexin
(56)
Protein domain
:
Annexin V
(31)
Human (Homo sapiens) [TaxId: 9606]
(10)
1a
d1anwa_
A:
1b
d1anwb_
B:
[
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1anwA02 (A:87-160)
1b: CATH_1anwA03 (A:161-246)
1c: CATH_1anwB03 (B:161-246)
1d: CATH_1anwB02 (B:87-160)
1e: CATH_1anwA01 (A:14-86)
1f: CATH_1anwB01 (B:14-86)
1g: CATH_1anwA04 (A:247-318)
1h: CATH_1anwB04 (B:247-318)
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(
)
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(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Annexin V; domain 1
(80)
Homologous Superfamily
:
[code=1.10.220.10, no name defined]
(58)
Human (Homo sapiens)
(22)
1a
1anwA02
A:87-160
1b
1anwA03
A:161-246
1c
1anwB03
B:161-246
1d
1anwB02
B:87-160
1e
1anwA01
A:14-86
1f
1anwB01
B:14-86
1g
1anwA04
A:247-318
1h
1anwB04
B:247-318
[
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Pfam Domains
(0, 0)
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all PFAM domains
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Asym.Unit (112 KB)
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