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1AMO
Biol. Unit 1
Info
Asym.Unit (210 KB)
Biol.Unit 1 (105 KB)
Biol.Unit 2 (104 KB)
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(1)
Title
:
THREE-DIMENSIONAL STRUCTURE OF NADPH-CYTOCHROME P450 REDUCTASE: PROTOTYPE FOR FMN-AND FAD-CONTAINING ENZYMES
Authors
:
M. Wang, D. L. Roberts, R. Paschke, T. M. Shea, B. S. S. Masters, J. J. P. Kim
Date
:
17 Jun 97 (Deposition) - 17 Jun 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
X-Ray Crystallography, Flavoprotein, Nitric Oxide Synthase, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Wang, D. L. Roberts, R. Paschke, T. M. Shea, B. S. Masters, J. J. Kim
Three-Dimensional Structure Of Nadph-Cytochrome P450 Reductase: Prototype For Fmn- And Fad-Containing Enzymes.
Proc. Natl. Acad. Sci. Usa V. 94 8411 1997
(for further references see the
PDB file header
)
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Hetero Components
(3, 3)
Info
All Hetero Components
1a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
1b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
2a: FLAVIN MONONUCLEOTIDE (FMNa)
2b: FLAVIN MONONUCLEOTIDE (FMNb)
3a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
3b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FAD
1
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
2
FMN
1
Ligand/Ion
FLAVIN MONONUCLEOTIDE
3
NAP
1
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:319 , ARG A:424 , ARG A:454 , TYR A:455 , TYR A:456 , SER A:457 , CYS A:472 , ALA A:473 , VAL A:474 , TYR A:478 , GLY A:488 , VAL A:489 , ALA A:490 , THR A:491 , ALA A:538 , TRP A:677 , HOH A:774 , HOH A:814
BINDING SITE FOR RESIDUE FAD A 750
2
AC2
SOFTWARE
SER A:86 , GLN A:87 , THR A:88 , GLY A:89 , THR A:90 , ALA A:91 , ALA A:138 , THR A:139 , TYR A:140 , GLY A:141 , GLY A:143 , LEU A:173 , GLY A:174 , ASN A:175 , HIS A:180 , PHE A:181 , ASN A:182 , ASP A:208 , LEU A:212
BINDING SITE FOR RESIDUE FMN A 751
3
AC3
SOFTWARE
ARG A:298 , GLY A:534 , THR A:535 , CYS A:566 , ARG A:567 , SER A:596 , ARG A:597 , LYS A:602 , TYR A:604 , GLN A:606 , MET A:636 , ASP A:639 , HOH A:767 , HOH A:807
BINDING SITE FOR RESIDUE NAP A 752
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: FLAVODOXIN_LIKE (A:80-224)
2: FAD_FR (A:279-521)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FLAVODOXIN_LIKE
PS50902
Flavodoxin-like domain profile.
NCPR_RAT
80-224
1
A:80-224
-
2
FAD_FR
PS51384
Ferredoxin reductase-type FAD binding domain profile.
NCPR_RAT
279-521
1
A:279-521
-
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(3, 6)
Info
All SCOP Domains
1a: SCOP_d1amoa1 (A:243-518)
1b: SCOP_d1amob1 (B:243-518)
2a: SCOP_d1amoa3 (A:519-678)
2b: SCOP_d1amob3 (B:519-678)
3a: SCOP_d1amoa2 (A:64-235)
3b: SCOP_d1amob2 (B:64-235)
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)
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)
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)
Families
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Reductase/isomerase/elongation factor common domain
(381)
Superfamily
:
Riboflavin synthase domain-like
(130)
Family
:
NADPH-cytochrome p450 reductase FAD-binding domain-like
(16)
Protein domain
:
NADPH-cytochrome p450 reductase
(4)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(4)
1a
d1amoa1
A:243-518
1b
d1amob1
B:243-518
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ferredoxin reductase-like, C-terminal NADP-linked domain
(120)
Superfamily
:
Ferredoxin reductase-like, C-terminal NADP-linked domain
(120)
Family
:
NADPH-cytochrome p450 reductase-like
(8)
Protein domain
:
NADPH-cytochrome p450 reductase
(4)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(4)
2a
d1amoa3
A:519-678
2b
d1amob3
B:519-678
Fold
:
Flavodoxin-like
(1057)
Superfamily
:
Flavoproteins
(208)
Family
:
Cytochrome p450 reductase N-terminal domain-like
(7)
Protein domain
:
NADPH-cytochrome p450 reductase, N-terminal domain
(5)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(4)
3a
d1amoa2
A:64-235
3b
d1amob2
B:64-235
[
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CATH Domains
(4, 8)
Info
all CATH domains
1a: CATH_1amoA01 (A:64-235)
1b: CATH_1amoB01 (B:64-235)
2a: CATH_1amoB04 (B:519-676)
2b: CATH_1amoA04 (A:519-678)
3a: CATH_1amoA03 (A:325-450)
3b: CATH_1amoB03 (B:325-450)
4a: CATH_1amoA02 (A:271-324,A:451-518)
4b: CATH_1amoB02 (B:271-324,B:451-518)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.360, no name defined]
(150)
Norway rat (Rattus norvegicus)
(4)
1a
1amoA01
A:64-235
1b
1amoB01
B:64-235
Homologous Superfamily
:
Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module
(85)
Norway rat (Rattus norvegicus)
(9)
2a
1amoB04
B:519-676
2b
1amoA04
A:519-678
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
NADPH-cytochrome p450 Reductase; Chain A, domain 3
(8)
Homologous Superfamily
:
NADPH-cytochrome p450 Reductase; Chain A, domain 3
(8)
Norway rat (Rattus norvegicus)
(6)
3a
1amoA03
A:325-450
3b
1amoB03
B:325-450
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Elongation Factor Tu (Ef-tu); domain 3
(323)
Homologous Superfamily
:
Translation factors
(223)
Norway rat (Rattus norvegicus)
(9)
4a
1amoA02
A:271-324,A:451-518
4b
1amoB02
B:271-324,B:451-518
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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