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Asym. Unit
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Asym.Unit (50 KB)
Biol.Unit 1 (47 KB)
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(1)
Title
:
STRUCTURE OF APO-AZURIN FROM ALCALIGENES DENITRIFICANS AT 1.8 ANGSTROMS RESOLUTION
Authors
:
E. N. Baker, B. F. Anderson, K. A. Blackwell
Date
:
11 Nov 93 (Deposition) - 31 Jan 94 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Electron Transport(Cadmium Binding)
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
W. E. Shepard, R. L. Kingston, B. F. Anderson, E. N. Baker
Structure Of Apo-Azurin From Alcaligenes Denitrificans At 1. 8 A Resolution.
Acta Crystallogr. , Sect. D V. 49 331 1993
(for further references see the
PDB file header
)
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Hetero Components
(2, 6)
Info
All Hetero Components
1a: CADMIUM ION (CDa)
1b: CADMIUM ION (CDb)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CD
2
Ligand/Ion
CADMIUM ION
2
SO4
4
Ligand/Ion
SULFATE ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: MTA (AUTHOR)
08: MTB (AUTHOR)
09: S1A (AUTHOR)
10: S1B (AUTHOR)
11: S2A (AUTHOR)
12: S2B (AUTHOR)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:45 , HIS A:46 , CYS A:112 , HIS A:117 , MET A:121
BINDING SITE FOR RESIDUE CD A 130
02
AC2
SOFTWARE
ALA A:75 , GLY A:76 , HIS A:83 , HOH A:171 , HOH A:181 , HOH A:240
BINDING SITE FOR RESIDUE SO4 A 131
03
AC3
SOFTWARE
LYS A:56 , LYS A:122 , LYS B:38 , HOH B:157
BINDING SITE FOR RESIDUE SO4 A 132
04
AC4
SOFTWARE
GLY B:45 , HIS B:46 , CYS B:112 , HIS B:117 , MET B:121
BINDING SITE FOR RESIDUE CD B 130
05
AC5
SOFTWARE
GLY B:76 , HIS B:83 , HOH B:188 , HOH B:189 , HOH B:252
BINDING SITE FOR RESIDUE SO4 B 131
06
AC6
SOFTWARE
LYS A:38 , LYS B:56 , LYS B:122 , HOH B:196
BINDING SITE FOR RESIDUE SO4 B 132
07
MTA
AUTHOR
CD A:130 , GLY A:45 , HIS A:46 , CYS A:112 , HIS A:117 , MET A:121
CADMIUM SITE IN CHAIN A
08
MTB
AUTHOR
CD B:130 , GLY B:45 , HIS B:46 , CYS B:112 , HIS B:117 , MET B:121
CADMIUM SITE IN CHAIN B
09
S1A
AUTHOR
SO4 A:131 , HIS A:83 , GLY A:76
SULFATE 1 SITE IN CHAIN A
10
S1B
AUTHOR
SO4 B:131 , HIS B:83 , GLY B:76
SULFATE 1 SITE IN CHAIN B
11
S2A
AUTHOR
SO4 A:132 , LYS A:56 , LYS A:122
SULFATE 2 SITE IN CHAIN A
12
S2B
AUTHOR
SO4 B:132 , LYS B:56 , LYS B:122
SULFATE 2 SITE IN CHAIN B
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: COPPER_BLUE (A:105-121,B:105-121)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
COPPER_BLUE
PS00196
Type-1 copper (blue) proteins signature.
AZUR_ACHDE
125-141
2
A:105-121
B:105-121
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1aiza_ (A:)
1b: SCOP_d1aizb_ (B:)
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Cupredoxin-like
(545)
Superfamily
:
Cupredoxins
(543)
Family
:
Plastocyanin/azurin-like
(241)
Protein domain
:
Azurin
(95)
Alcaligenes denitrificans [TaxId: 32002]
(8)
1a
d1aiza_
A:
1b
d1aizb_
B:
[
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1aizA00 (A:1-129)
1b: CATH_1aizB00 (B:1-129)
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Classes
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)
(
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)
Topologies
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Cupredoxins - blue copper proteins
(420)
Achromobacter denitrificans. Organism_taxid: 32002
(1)
1a
1aizA00
A:1-129
1b
1aizB00
B:1-129
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Pfam Domains
(0, 0)
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all PFAM domains
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Asymmetric Unit 1
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