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Asym. Unit
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Asym.Unit (134 KB)
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Models
(14 )
Title
:
FIFTH EGF-LIKE DOMAIN OF THROMBOMODULIN (TMEGF5), NMR, 14 STRUCTURES
Authors
:
B. A. Sampoli-Benitez, M. J. Hunter, D. P. Meininger, E. A. Komives
Date
:
18 Feb 97 (Deposition) - 24 Dec 97 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (14 x)
Keywords
:
Blood Coagulation, Anticoagulant, Fibrinogen, Nmr, Peptide Synthesis, Protein C, Thrombin, Disulfide Bonds
(Keyword Search:
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Reference
:
B. A. Sampoli Benitez, M. J. Hunter, D. P. Meininger, E. A. Komives
Structure Of The Fifth Egf-Like Domain Of Thrombomodulin: An Egf-Like Domain With A Novel Disulfide-Bonding Pattern.
J. Mol. Biol. V. 273 913 1997
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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PROSITE Patterns/Profiles
(3, 2)
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1: EGF_3 (-|-|-|A:37-40)
2: EGF_2 (-|A:21-35)
3: EGF_CA (-|A:37-40)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EGF_3
PS50026
EGF-like domain profile.
TRBM_HUMAN
284-324
325-361
365-405
441-481
1
-
-
-
A:37-40
2
EGF_2
PS01186
EGF-like domain signature 2.
TRBM_HUMAN
308-323
425-439
1
-
A:21-35
3
EGF_CA
PS01187
Calcium-binding EGF-like domain signature.
TRBM_HUMAN
325-349
441-464
1
-
A:37-40
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Exons
(1, 1)
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Exon 1.1 (A:1-40)
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1: Boundary -/1.1
2: Boundary 1.1/-
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ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000377103
1
ENSE00001472793
chr20:
23030378-23026270
4109
TRBM_HUMAN
1-654
654
1
A:1-40
40
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SCOP Domains
(1, 1)
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1a: SCOP_d1adxa_ (A:)
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Small proteins
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Knottins (small inhibitors, toxins, lectins)
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EGF/Laminin
(347)
Family
:
EGF-type module
(304)
Protein domain
:
Thrombomodulin, different EGF-like domains
(6)
Human (Homo sapiens) [TaxId: 9606]
(6)
1a
d1adxa_
A:
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CATH Domains
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1a: CATH_1adxA00 (A:1-40)
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Mainly Beta
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Architecture
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Ribbon
(789)
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Laminin
(270)
Homologous Superfamily
:
Laminin
(263)
Human (Homo sapiens)
(195)
1a
1adxA00
A:1-40
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Asymmetric Unit 1
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