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1A4Y
Asym. Unit
Info
Asym.Unit (185 KB)
Biol.Unit 1 (181 KB)
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(1)
Title
:
RIBONUCLEASE INHIBITOR-ANGIOGENIN COMPLEX
Authors
:
A. C. Papageorgiou, K. R. Acharya
Date
:
08 Feb 98 (Deposition) - 14 Oct 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,D,E
Biol. Unit 1: A,B,D,E (1x)
Keywords
:
Complex (Inhibitor/Nuclease), Complex (Ri-Ang), Hydrolase Molecular Recognition, Epitope Mapping, Leucine-Rich Repeats
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. C. Papageorgiou, R. Shapiro, K. R. Acharya
Molecular Recognition Of Human Angiogenin By Placental Ribonuclease Inhibitor--An X-Ray Crystallographic Study At 2. 0 A Resolution.
Embo J. V. 16 5162 1997
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Label:
Sorry, no Info available
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]
Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
[
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]
SAPs(SNPs)/Variants
(15, 30)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_044147 (Q12L, chain B/E, )
02: VAR_073021 (Y14H, chain B/E, )
03: VAR_044148 (K17E, chain B/E, )
04: VAR_044149 (K17I, chain B/E, )
05: VAR_073022 (D22G, chain B/E, )
06: VAR_044150 (S28N, chain B/E, )
07: VAR_044151 (R31K, chain B/E, )
08: VAR_044152 (C39W, chain B/E, )
09: VAR_044153 (K40I, chain B/E, )
10: VAR_044154 (I46V, chain B/E, )
11: VAR_013148 (K60E, chain B/E, )
12: VAR_044155 (P112L, chain B/E, )
13: VAR_044156 (V113I, chain B/E, )
14: VAR_044157 (H114R, chain B/E, )
15: VAR_014726 (P169L, chain A/D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_044147
Q
36
L
ANGI_HUMAN
Disease (ALS9)
---
B/E
Q
12
L
02
UniProt
VAR_073021
Y
38
H
ANGI_HUMAN
Disease (ALS9)
---
B/E
Y
14
H
03
UniProt
VAR_044148
K
41
E
ANGI_HUMAN
Disease (ALS9)
---
B/E
K
17
E
04
UniProt
VAR_044149
K
41
I
ANGI_HUMAN
Disease (ALS9)
---
B/E
K
17
I
05
UniProt
VAR_073022
D
46
G
ANGI_HUMAN
Disease (ALS9)
---
B/E
D
22
G
06
UniProt
VAR_044150
S
52
N
ANGI_HUMAN
Disease (ALS9)
---
B/E
S
28
N
07
UniProt
VAR_044151
R
55
K
ANGI_HUMAN
Disease (ALS9)
---
B/E
R
31
K
08
UniProt
VAR_044152
C
63
W
ANGI_HUMAN
Disease (ALS9)
---
B/E
C
39
W
09
UniProt
VAR_044153
K
64
I
ANGI_HUMAN
Disease (ALS9)
---
B/E
K
40
I
10
UniProt
VAR_044154
I
70
V
ANGI_HUMAN
Unclassified
---
B/E
I
46
V
11
UniProt
VAR_013148
K
84
E
ANGI_HUMAN
Polymorphism
17560
B/E
K
60
E
12
UniProt
VAR_044155
P
136
L
ANGI_HUMAN
Disease (ALS9)
---
B/E
P
112
L
13
UniProt
VAR_044156
V
137
I
ANGI_HUMAN
Disease (ALS9)
---
B/E
V
113
I
14
UniProt
VAR_044157
H
138
R
ANGI_HUMAN
Disease (ALS9)
---
B/E
H
114
R
15
UniProt
VAR_014726
P
170
L
RINI_HUMAN
Polymorphism
17585
A/D
P
169
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: RNASE_PANCREATIC (B:39-45,E:39-45)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RNASE_PANCREATIC
PS00127
Pancreatic ribonuclease family signature.
ANGI_HUMAN
63-69
2
B:39-45
E:39-45
[
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Exons
(10, 20)
Info
All Exons
Exon 1.6d (A:1-33 | D:1-33)
Exon 1.7e (A:33-90 | D:33-90)
Exon 1.7g (A:90-147 | D:90-147)
Exon 1.7p (A:147-204 | D:147-204)
Exon 1.8b (A:204-261 | D:204-261)
Exon 1.9a (A:261-318 | D:261-318)
Exon 1.10 (A:318-375 | D:318-375)
Exon 1.11b (A:375-432 | D:375-432)
Exon 1.11j (A:432-460 | D:432-460)
Exon 2.3c (B:1-123 | E:1-123)
View:
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All Exon Boundaries
01: Boundary 1.4c/1.6d
02: Boundary 1.6d/1.7e
03: Boundary 1.7e/1.7g
04: Boundary 1.7g/1.7p
05: Boundary 1.7p/1.8b
06: Boundary 1.8b/1.9a
07: Boundary 1.9a/1.10
08: Boundary 1.10/1.11b
09: Boundary 1.11b/1.11j
10: Boundary 1.11j/-
11: Boundary 2.2a/2.3c
12: Boundary 2.3c/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2b
ENST00000397615
2b
ENSE00002189970
chr11:
506800-506609
192
RINI_HUMAN
-
0
0
-
-
1.4c
ENST00000397615
4c
ENSE00001369908
chr11:
504996-504824
173
RINI_HUMAN
-
0
0
-
-
1.6d
ENST00000397615
6d
ENSE00002173795
chr11:
502249-502062
188
RINI_HUMAN
1-34
34
2
A:1-33
D:1-33
33
33
1.7e
ENST00000397615
7e
ENSE00000656253
chr11:
500654-500484
171
RINI_HUMAN
34-91
58
2
A:33-90
D:33-90
58
58
1.7g
ENST00000397615
7g
ENSE00000656254
chr11:
499999-499829
171
RINI_HUMAN
91-148
58
2
A:90-147
D:90-147
58
58
1.7p
ENST00000397615
7p
ENSE00000656255
chr11:
499185-499015
171
RINI_HUMAN
148-205
58
2
A:147-204
D:147-204
58
58
1.8b
ENST00000397615
8b
ENSE00000656256
chr11:
498933-498763
171
RINI_HUMAN
205-262
58
2
A:204-261
D:204-261
58
58
1.9a
ENST00000397615
9a
ENSE00000656258
chr11:
498627-498457
171
RINI_HUMAN
262-319
58
2
A:261-318
D:261-318
58
58
1.10
ENST00000397615
10
ENSE00000656259
chr11:
498141-497971
171
RINI_HUMAN
319-376
58
2
A:318-375
D:318-375
58
58
1.11b
ENST00000397615
11b
ENSE00000656260
chr11:
495053-494883
171
RINI_HUMAN
376-433
58
2
A:375-432
D:375-432
58
58
1.11j
ENST00000397615
11j
ENSE00001827718
chr11:
494778-494515
264
RINI_HUMAN
433-461
29
2
A:432-460
D:432-460
29
29
2.2a
ENST00000397990
2a
ENSE00002201651
chr14:
21156932-21157033
102
ANGI_HUMAN
-
0
0
-
-
2.3c
ENST00000397990
3c
ENSE00001758396
chr14:
21161706-21162338
633
ANGI_HUMAN
1-153
153
2
B:1-123
E:1-123
123
123
[
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]
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1a4yb_ (B:)
1b: SCOP_d1a4ye_ (E:)
2a: SCOP_d1a4ya_ (A:)
2b: SCOP_d1a4yd_ (D:)
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(
)
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(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
RNase A-like
(356)
Superfamily
:
RNase A-like
(356)
Family
:
Ribonuclease A-like
(347)
Protein domain
:
Angiogenin
(32)
Human (Homo sapiens) [TaxId: 9606]
(30)
1a
d1a4yb_
B:
1b
d1a4ye_
E:
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
(112)
Superfamily
:
RNI-like
(17)
Family
:
28-residue LRR
(9)
Protein domain
:
Ribonuclease inhibitor
(3)
Human (Homo sapiens) [TaxId: 9606]
(1)
2a
d1a4ya_
A:
2b
d1a4yd_
D:
[
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1a4yA00 (A:1-460)
1b: CATH_1a4yD00 (D:1-460)
2a: CATH_1a4yB00 (B:1-123)
2b: CATH_1a4yE00 (E:1-123)
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(
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Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Horseshoe
(92)
Topology
:
Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
(73)
Homologous Superfamily
:
Ribonuclease Inhibitor
(73)
Human (Homo sapiens)
(26)
1a
1a4yA00
A:1-460
1b
1a4yD00
D:1-460
Architecture
:
Roll
(3276)
Topology
:
P-30 Protein
(299)
Homologous Superfamily
:
P-30 Protein
(299)
Human (Homo sapiens)
(46)
2a
1a4yB00
B:1-123
2b
1a4yE00
E:1-123
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain E
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Asym.Unit (185 KB)
Header - Asym.Unit
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