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1A4M
Biol. Unit 1
Info
Asym.Unit (255 KB)
Biol.Unit 1 (66 KB)
Biol.Unit 2 (66 KB)
Biol.Unit 3 (66 KB)
Biol.Unit 4 (66 KB)
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(1)
Title
:
ADA STRUCTURE COMPLEXED WITH PURINE RIBOSIDE AT PH 7.0
Authors
:
Z. Wang, F. A. Quiocho
Date
:
31 Jan 98 (Deposition) - 14 Oct 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Hydrolase, Adenosine Deaminase, Purine Riboside
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
Z. Wang, F. A. Quiocho
Complexes Of Adenosine Deaminase With Two Potent Inhibitors: X-Ray Structures In Four Independent Molecules At Ph Of Maximum Activity.
Biochemistry V. 37 8314 1998
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 6-HYDROXY-1,6-DIHYDRO PURINE NUCLE... (PRHa)
1b: 6-HYDROXY-1,6-DIHYDRO PURINE NUCLE... (PRHb)
1c: 6-HYDROXY-1,6-DIHYDRO PURINE NUCLE... (PRHc)
1d: 6-HYDROXY-1,6-DIHYDRO PURINE NUCLE... (PRHd)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
2c: ZINC ION (ZNc)
2d: ZINC ION (ZNd)
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No.
Name
Count
Type
Full Name
1
PRH
1
Ligand/Ion
6-HYDROXY-1,6-DIHYDRO PURINE NUCLEOSIDE
2
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(3, 3)
Info
All Sites
1: AC4 (SOFTWARE)
2: AC5 (SOFTWARE)
3: CIA (UNKNOWN)
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No.
Name
Evidence
Residues
Description
1
AC4
SOFTWARE
HIS A:15 , HIS A:17 , HIS A:214 , ASP A:295 , PRH A:354
BINDING SITE FOR RESIDUE ZN A 400
2
AC5
SOFTWARE
HIS A:17 , ASP A:19 , PHE A:61 , LEU A:62 , PHE A:65 , TYR A:102 , LEU A:106 , MET A:155 , ALA A:183 , GLY A:184 , HIS A:214 , GLU A:217 , HIS A:238 , ASP A:295 , ASP A:296 , ZN A:400 , HOH A:2348 , HOH A:2357
BINDING SITE FOR RESIDUE PRH A 354
3
CIA
UNKNOWN
HIS A:15 , HIS A:17 , ASP A:19 , GLY A:184 , HIS A:214 , GLU A:217 , HIS A:238 , ASP A:295 , ASP A:296
THE SITE BINDS ADENOSINE AND CONVERT IT TO INOSINE AND AMMONIAGENE.
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: A_DEAMINASE (A:291-297)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
A_DEAMINASE
PS00485
Adenosine and AMP deaminase signature.
ADA_MOUSE
291-297
1
A:291-297
-
-
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1a4ma_ (A:)
1b: SCOP_d1a4mb_ (B:)
1c: SCOP_d1a4mc_ (C:)
1d: SCOP_d1a4md_ (D:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Metallo-dependent hydrolases
(273)
Family
:
Adenosine/AMP deaminase
(36)
Protein domain
:
Adenosine deaminase (ADA)
(24)
Mouse (Mus musculus) [TaxId: 10090]
(10)
1a
d1a4ma_
A:
1b
d1a4mb_
B:
1c
d1a4mc_
C:
1d
d1a4md_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1a4mA00 (A:4-352)
1b: CATH_1a4mB00 (B:504-852)
1c: CATH_1a4mC00 (C:1004-1352)
1d: CATH_1a4mD00 (D:1504-1852)
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Metal-dependent hydrolases
(190)
House mouse (Mus musculus)
(9)
1a
1a4mA00
A:4-352
1b
1a4mB00
B:504-852
1c
1a4mC00
C:1004-1352
1d
1a4mD00
D:1504-1852
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (255 KB)
Header - Asym.Unit
Biol.Unit 1 (66 KB)
Header - Biol.Unit 1
Biol.Unit 2 (66 KB)
Header - Biol.Unit 2
Biol.Unit 3 (66 KB)
Header - Biol.Unit 3
Biol.Unit 4 (66 KB)
Header - Biol.Unit 4
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