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1A29
Asym. Unit
Info
Asym.Unit (28 KB)
Biol.Unit 1 (23 KB)
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(1)
Title
:
CALMODULIN COMPLEXED WITH TRIFLUOPERAZINE (1:2 COMPLEX)
Authors
:
Zs. Bocskei, V. Harmat, B. G. Vertessy, J. Ovadi, G. Naray-Szabo
Date
:
19 Jan 98 (Deposition) - 16 Sep 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.74
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Calcium-Binding Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. G. Vertessy, V. Harmat, Z. Bocskei, G. Naray-Szabo, F. Orosz, J. Ovadi
Simultaneous Binding Of Drugs With Different Chemical Structures To Ca2+-Calmodulin: Crystallographic And Spectroscopic Studies.
Biochemistry V. 37 15300 1998
(for further references see the
PDB file header
)
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Hetero Components
(2, 6)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
2a: 10-[3-(4-METHYL-PIPERAZIN-1-YL)-PR... (TFPa)
2b: 10-[3-(4-METHYL-PIPERAZIN-1-YL)-PR... (TFPb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CA
4
Ligand/Ion
CALCIUM ION
2
TFP
2
Ligand/Ion
10-[3-(4-METHYL-PIPERAZIN-1-YL)-PROPYL]-2-TRIFLUOROMETHYL-10H-PHENOTHIAZINE
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:20 , ASP A:22 , ASP A:24 , THR A:26 , GLU A:31
BINDING SITE FOR RESIDUE CA A 149
2
AC2
SOFTWARE
ASP A:56 , ASP A:58 , ASN A:60 , THR A:62 , GLU A:67
BINDING SITE FOR RESIDUE CA A 150
3
AC3
SOFTWARE
ASP A:93 , ASP A:95 , ASN A:97 , TYR A:99 , GLU A:104
BINDING SITE FOR RESIDUE CA A 151
4
AC4
SOFTWARE
ASP A:129 , ASP A:131 , ASP A:133 , GLN A:135 , GLU A:140
BINDING SITE FOR RESIDUE CA A 152
5
AC5
SOFTWARE
ILE A:100 , LEU A:105 , MET A:124 , GLU A:127 , VAL A:136 , PHE A:141 , MET A:144 , TFP A:154
BINDING SITE FOR RESIDUE TFP A 153
6
AC6
SOFTWARE
GLU A:11 , GLU A:14 , ALA A:15 , MET A:109 , GLU A:114 , LEU A:116 , GLU A:120 , TFP A:153
BINDING SITE FOR RESIDUE TFP A 154
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 8)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (A:7-42|A:43-78|A:80-115|A:116-146)
2: EF_HAND_1 (A:20-32|A:56-68|A:93-105|A:129-141)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
CALM_BOVIN
8-43
44-79
81-116
117-149
4
A:7-42
A:43-78
A:80-115
A:116-146
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
CALM_BOVIN
21-33
57-69
94-106
130-142
4
A:20-32
A:56-68
A:93-105
A:129-141
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Exons
(5, 5)
Info
All Exons
Exon 1.8 (A:3-11)
Exon 1.9 (A:11-59)
Exon 1.10 (A:59-94)
Exon 1.11 (A:95-140)
Exon 1.12 (A:140-146)
View:
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All Exon Boundaries
1: Boundary 1.7/1.8
2: Boundary 1.8/1.9
3: Boundary 1.9/1.10
4: Boundary 1.10/1.11
5: Boundary 1.11/1.12
6: Boundary 1.12/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.7
ENSBTAT00000019411
7
ENSBTAE00000320796
chr18:
53531460-53531549
90
CALM_BOVIN
1-1
1
0
-
-
1.8
ENSBTAT00000019411
8
ENSBTAE00000157831
chr18:
53535790-53535820
31
CALM_BOVIN
2-12
11
1
A:3-11
9
1.9
ENSBTAT00000019411
9
ENSBTAE00000428812
chr18:
53537981-53538124
144
CALM_BOVIN
12-60
49
1
A:11-59
49
1.10
ENSBTAT00000019411
10
ENSBTAE00000416563
chr18:
53538265-53538371
107
CALM_BOVIN
60-95
36
1
A:59-94
36
1.11
ENSBTAT00000019411
11
ENSBTAE00000389868
chr18:
53538749-53538884
136
CALM_BOVIN
96-141
46
1
A:95-140
46
1.12
ENSBTAT00000019411
12
ENSBTAE00000245541
chr18:
53538967-53540533
1567
CALM_BOVIN
141-149
9
1
A:140-146
7
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1a29a_ (A:)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
Calmodulin-like
(356)
Protein domain
:
Calmodulin
(152)
Cow (Bos taurus) [TaxId: 9913]
(16)
1a
d1a29a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1a29A00 (A:3-146)
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Organisms
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)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Recoverin; domain 1
(474)
Homologous Superfamily
:
EF-hand
(412)
Cattle (Bos taurus)
(44)
1a
1a29A00
A:3-146
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (28 KB)
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