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1A1H
Asym. Unit
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Asym.Unit (32 KB)
Biol.Unit 1 (28 KB)
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(1)
Title
:
QGSR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)
Authors
:
M. Elrod-Erickson, T. E. Benson, C. O. Pabo
Date
:
10 Dec 97 (Deposition) - 10 Jun 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Complex (Zinc Finger/Dna), Zinc Finger, Dna-Binding Protein, Transcription/Dna Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Elrod-Erickson, T. E. Benson, C. O. Pabo
High-Resolution Structures Of Variant Zif268-Dna Complexes: Implications For Understanding Zinc Finger-Dna Recognition.
Structure V. 6 451 1998
(for further references see the
PDB file header
)
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
1c: ZINC ION (ZNc)
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No.
Name
Count
Type
Full Name
1
ZN
3
Ligand/Ion
ZINC ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:107 , CYS A:112 , HIS A:125 , HIS A:129
BINDING SITE FOR RESIDUE ZN A 201
2
AC2
SOFTWARE
CYS A:137 , CYS A:140 , HIS A:153 , HIS A:157
BINDING SITE FOR RESIDUE ZN A 202
3
AC3
SOFTWARE
CYS A:165 , CYS A:168 , HIS A:181 , HIS A:185
BINDING SITE FOR RESIDUE ZN A 203
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: ZINC_FINGER_C2H2_1 (A:107-129|A:137-157|A:165-185)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_FINGER_C2H2_1
PS00028
Zinc finger C2H2 type domain signature.
EGR1_MOUSE
338-360
368-388
396-416
3
A:107-129
A:137-157
A:165-185
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1a1ha1 (A:103-131)
1b: SCOP_d1a1ha2 (A:132-159)
1c: SCOP_d1a1ha3 (A:160-187)
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Class
:
Small proteins
(3458)
Fold
:
beta-beta-alpha zinc fingers
(183)
Superfamily
:
beta-beta-alpha zinc fingers
(183)
Family
:
Classic zinc finger, C2H2
(162)
Protein domain
:
ZIF268
(14)
Mouse (Mus musculus) [TaxId: 10090]
(14)
1a
d1a1ha1
A:103-131
1b
d1a1ha2
A:132-159
1c
d1a1ha3
A:160-187
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_1a1hA02 (A:133-159)
1b: CATH_1a1hA03 (A:160-186)
1c: CATH_1a1hA01 (A:103-132)
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Double Stranded RNA Binding Domain
(204)
Homologous Superfamily
:
Classic Zinc Finger
(45)
[unclassified]
(29)
1a
1a1hA02
A:133-159
1b
1a1hA03
A:160-186
1c
1a1hA01
A:103-132
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Pfam Domains
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Asymmetric Unit 1
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