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1A0R
Asym. Unit
Info
Asym.Unit (100 KB)
Biol.Unit 1 (96 KB)
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(1)
Title
:
HETEROTRIMERIC COMPLEX OF PHOSDUCIN/TRANSDUCIN BETA-GAMMA
Authors
:
A. Loew, Y. -K. Ho, T. L. Blundell, B. Bax
Date
:
05 Dec 97 (Deposition) - 30 Dec 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : B,G,P
Biol. Unit 1: B,G,P (1x)
Keywords
:
Phosducin, Transducin, Beta-Gamma, Signal Transduction, Regulation, Phosphorylation, G Proteins, Thioredoxin, Vision, Meka, Complex (Transducer/Transduction), Post- Translational Modification, Farnesyl, Farnesylation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Loew, Y. K. Ho, T. Blundell, B. Bax
Phosducin Induces A Structural Change In Transducin Beta Gamma.
Structure V. 6 1007 1998
(for further references see the
PDB file header
)
[
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
2a: FARNESYL (FARa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACE
1
Mod. Amino Acid
ACETYL GROUP
2
FAR
1
Ligand/Ion
FARNESYL
[
close Hetero Component info
]
Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA B:309 , ASP B:312 , ARG B:314 , VAL B:315 , THR B:329 , SER B:331 , ASP B:333 , PHE B:335 , LYS B:337 , TRP B:339
BINDING SITE FOR RESIDUE FAR G 72
[
close Site info
]
SAPs(SNPs)/Variants
(19, 19)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_078279 (L30F, chain B, )
02: VAR_078280 (R52G, chain B, )
03: VAR_078281 (G64V, chain B, )
04: VAR_076644 (D76E, chain B, )
05: VAR_076643 (D76G, chain B, )
06: VAR_076645 (G77S, chain B, )
07: VAR_076646 (K78R, chain B, )
08: VAR_076647 (I80N, chain B, )
09: VAR_076648 (I80T, chain B, )
10: VAR_078282 (H91R, chain B, )
11: VAR_078283 (A92T, chain B, )
12: VAR_078284 (P94S, chain B, )
13: VAR_076649 (L95P, chain B, )
14: VAR_078285 (R96L, chain B, )
15: VAR_076650 (M101V, chain B, )
16: VAR_078286 (A106T, chain B, )
17: VAR_078287 (D118G, chain B, )
18: VAR_076651 (A326T, chain B, )
19: VAR_078288 (K337Q, chain B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_078279
L
30
F
GBB1_HUMAN
Unclassified (MRD42)
764997309
B
L
30
F
02
UniProt
VAR_078280
R
52
G
GBB1_HUMAN
Disease (MRD42)
---
B
R
52
G
03
UniProt
VAR_078281
G
64
V
GBB1_HUMAN
Disease (MRD42)
---
B
G
64
V
04
UniProt
VAR_076644
D
76
E
GBB1_HUMAN
Disease (MRD42)
869312822
B
D
76
E
05
UniProt
VAR_076643
D
76
G
GBB1_HUMAN
Disease (MRD42)
869312821
B
D
76
G
06
UniProt
VAR_076645
G
77
S
GBB1_HUMAN
Disease (MRD42)
758432471
B
G
77
S
07
UniProt
VAR_076646
K
78
R
GBB1_HUMAN
Disease (MRD42)
869312823
B
K
78
R
08
UniProt
VAR_076647
I
80
N
GBB1_HUMAN
Disease (MRD42)
752746786
B
I
80
N
09
UniProt
VAR_076648
I
80
T
GBB1_HUMAN
Disease (MRD42)
752746786
B
I
80
T
10
UniProt
VAR_078282
H
91
R
GBB1_HUMAN
Unclassified (MRD42)
---
B
H
91
R
11
UniProt
VAR_078283
A
92
T
GBB1_HUMAN
Disease (MRD42)
---
B
A
92
T
12
UniProt
VAR_078284
P
94
S
GBB1_HUMAN
Disease (MRD42)
---
B
P
94
S
13
UniProt
VAR_076649
L
95
P
GBB1_HUMAN
Disease (MRD42)
869312824
B
L
95
P
14
UniProt
VAR_078285
R
96
L
GBB1_HUMAN
Disease (MRD42)
---
B
R
96
L
15
UniProt
VAR_076650
M
101
V
GBB1_HUMAN
Disease (MRD42)
869312825
B
M
101
V
16
UniProt
VAR_078286
A
106
T
GBB1_HUMAN
Disease (MRD42)
---
B
A
106
T
17
UniProt
VAR_078287
D
118
G
GBB1_HUMAN
Disease (MRD42)
---
B
D
118
G
18
UniProt
VAR_076651
A
326
T
GBB1_HUMAN
Disease (MRD42)
869312826
B
A
326
T
19
UniProt
VAR_078288
K
337
Q
GBB1_HUMAN
Unclassified (MRD42)
---
B
K
337
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: G_PROTEIN_GAMMA (G:5-66)
2: WD_REPEATS_1 (B:70-84|B:157-171|B:285-299,B:70-8...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
G_PROTEIN_GAMMA
PS50058
G-protein gamma subunit domain profile.
GBG1_BOVIN
5-74
1
G:5-66
2
WD_REPEATS_1
PS00678
Trp-Asp (WD) repeats signature.
GBB1_BOVIN
70-84
157-171
285-299
3
B:70-84
B:157-171
B:285-299
GBB1_CANLF
70-84
157-171
285-299
3
B:70-84
B:157-171
B:285-299
GBB1_HUMAN
70-84
157-171
285-299
3
B:70-84
B:157-171
B:285-299
GBB1_MOUSE
70-84
157-171
285-299
3
B:70-84
B:157-171
B:285-299
[
close PROSITE info
]
Exons
(2, 2)
Info
All Exons
Exon 1.1c (G:2-32)
Exon 1.2 (G:33-66)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.1b/1.1c
2: Boundary 1.1c/1.2
3: Boundary 1.2/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENSBTAT00000003465
1b
ENSBTAE00000365422
chr4:
11462618-11462677
60
GBG1_BOVIN
-
0
0
-
-
1.1c
ENSBTAT00000003465
1c
ENSBTAE00000276323
chr4:
11462769-11462871
103
GBG1_BOVIN
1-32
32
1
G:2-32
31
1.2
ENSBTAT00000003465
2
ENSBTAE00000027869
chr4:
11468951-11469221
271
GBG1_BOVIN
33-74
42
1
G:33-66
34
[
close EXON info
]
SCOP Domains
(3, 3)
Info
All SCOP Domains
1a: SCOP_d1a0rg_ (G:)
2a: SCOP_d1a0rb_ (B:)
3a: SCOP_d1a0rp_ (P:)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Non-globular all-alpha subunits of globular proteins
(135)
Superfamily
:
Transducin (heterotrimeric G protein), gamma chain
(19)
Family
:
Transducin (heterotrimeric G protein), gamma chain
(19)
Protein domain
:
Transducin (heterotrimeric G protein), gamma chain
(19)
Cow (Bos taurus) [TaxId: 9913]
(19)
1a
d1a0rg_
G:
Class
:
All beta proteins
(24004)
Fold
:
7-bladed beta-propeller
(245)
Superfamily
:
WD40 repeat-like
(95)
Family
:
WD40-repeat
(53)
Protein domain
:
beta1-subunit of the signal-transducing G protein heterotrimer
(19)
Cow (Bos taurus) [TaxId: 9913]
(19)
2a
d1a0rb_
B:
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Phosducin
(4)
Protein domain
:
Phosducin
(4)
Cow (Bos taurus) [TaxId: 9913]
(1)
3a
d1a0rp_
P:
[
close SCOP info
]
CATH Domains
(4, 4)
Info
all CATH domains
1a: CATH_1a0rP01 (P:97-225)
2a: CATH_1a0rG00 (G:2-66)
3a: CATH_1a0rP02 (P:14-96)
4a: CATH_1a0rB00 (B:2-340)
View:
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(
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(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
Cattle (Bos taurus)
(5)
1a
1a0rP01
P:97-225
Class
:
Few Secondary Structures
(1120)
Architecture
:
Irregular
(1120)
Topology
:
G Protein Gi Gamma 2
(12)
Homologous Superfamily
:
[code=4.10.260.10, no name defined]
(10)
Cattle (Bos taurus)
(7)
2a
1a0rG00
G:2-66
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Phosducin; domain 2
(4)
Homologous Superfamily
:
Phosducin, domain 2
(4)
Cattle (Bos taurus)
(4)
3a
1a0rP02
P:14-96
Class
:
Mainly Beta
(13760)
Architecture
:
7 Propellor
(136)
Topology
:
Methylamine Dehydrogenase; Chain H
(136)
Homologous Superfamily
:
YVTN repeat-like/Quinoprotein amine dehydrogenase
(76)
Cattle (Bos taurus)
(18)
4a
1a0rB00
B:2-340
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
Select:
Label:
Sorry, no Info available
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Atom Selection
(currently selected atoms:
all
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Nucleic
Backbone
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Hetero
Ligand
Solvent
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Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain B
Chain G
Chain P
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