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12E8
Biol. Unit 1
Info
Asym.Unit (156 KB)
Biol.Unit 1 (78 KB)
Biol.Unit 2 (77 KB)
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(1)
Title
:
2E8 FAB FRAGMENT
Authors
:
B. Rupp, S. Trakhanov
Date
:
14 Mar 98 (Deposition) - 05 Aug 98 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : H,L,M,P
Biol. Unit 1: H,L (1x)
Biol. Unit 2: M,P (1x)
Keywords
:
Immunoglobulin
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Reference
:
S. Trakhanov, S. Parkin, R. Raffai, R. Milne, Y. M. Newhouse, K. H. Weisgraber, B. Rupp
Structure Of A Monoclonal 2E8 Fab Antibody Fragment Specifi For The Low-Density Lipoprotein-Receptor Binding Region Of Apolipoprotein E Refined At 1. 9 A.
Acta Crystallogr. , Sect. D V. Null 122 1999
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Hetero Components
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Sites
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SAPs(SNPs)/Variants
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Exons
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SCOP Domains
(4, 8)
Info
All SCOP Domains
1a: SCOP_d12e8h2 (H:115-214)
1b: SCOP_d12e8p2 (P:115-214)
2a: SCOP_d12e8l2 (L:108-214)
2b: SCOP_d12e8m2 (M:108-214)
3a: SCOP_d12e8h1 (H:1-114)
3b: SCOP_d12e8p1 (P:1-114)
4a: SCOP_d12e8l1 (L:1-107)
4b: SCOP_d12e8m1 (M:1-107)
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Protein Domains
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Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
C1 set domains (antibody constant domain-like)
(3013)
Protein domain
:
Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma
(608)
Mouse (Mus musculus) [TaxId: 10090]
(414)
1a
d12e8h2
H:115-214
1b
d12e8p2
P:115-214
Protein domain
:
Immunoglobulin light chain kappa constant domain, CL-kappa
(495)
Mouse (Mus musculus) [TaxId: 10090]
(345)
2a
d12e8l2
L:108-214
2b
d12e8m2
M:108-214
Family
:
V set domains (antibody variable domain-like)
(1919)
Protein domain
:
Immunoglobulin heavy chain variable domain, VH
(658)
Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]
(31)
3a
d12e8h1
H:1-114
3b
d12e8p1
P:1-114
Protein domain
:
Immunoglobulin light chain kappa variable domain, VL-kappa
(616)
Mouse (Mus musculus), cluster 4 [TaxId: 10090]
(211)
4a
d12e8l1
L:1-107
4b
d12e8m1
M:1-107
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_12e8L02 (L:108-211)
1b: CATH_12e8H02 (H:114-212)
1c: CATH_12e8P02 (P:114-212)
1d: CATH_12e8M02 (M:108-211)
1e: CATH_12e8L01 (L:1-107)
1f: CATH_12e8M01 (M:1-107)
1g: CATH_12e8H01 (H:1-113)
1h: CATH_12e8P01 (P:1-113)
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Organisms
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Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
House mouse (Mus musculus)
(616)
1a
12e8L02
L:108-211
1b
12e8H02
H:114-212
1c
12e8P02
P:114-212
1d
12e8M02
M:108-211
1e
12e8L01
L:1-107
1f
12e8M01
M:1-107
1g
12e8H01
H:1-113
1h
12e8P01
P:1-113
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Pfam Domains
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Show PDB file:
Asym.Unit (156 KB)
Header - Asym.Unit
Biol.Unit 1 (78 KB)
Header - Biol.Unit 1
Biol.Unit 2 (77 KB)
Header - Biol.Unit 2
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