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Entries with manually generated images from the JenaLib are marked in bold.
The structural information is taken from the first listed PDB/NDB entry. All sites can be visualized interactively (RasMol/Chime/VRML) on the JenaLib atlas pages.

From the Database of Sites

Structures with the requested type and number of components in the site: e.g. [ ... PPI(2) ... ].
20 entries selected from siteDir WHERE ucase(siteDir.Residue) RLIKE '.* PPI .*'
Note, that sites with one and the same site ID may differ and that different site IDs may describe related (homologous) sites.

The frequency of occurrence of a particular site component is given in parentheses.
Clicking on the identifier e.g. CAT describing a particular site starts a RasMol/Chime visualization.
Rendering:
Thick sticks or CPK - site component e.g. CAT

AC1 

Code	Class Resolution	Description
1tu9	prot     1.20	 AC1 [ ALA(1) EDO(1) GLN(1) GLY(1) HIS(1) HOH(5) ILE(2) LEU(3) LYS(1) MET(1) PHE(2) PPI(1) SER(1) THR(1) TRP(1) TYR(1) ]	CRYSTAL STRUCTURE OF A PROTEIN PA3967, A STRUCTURALLY HIGHLY HOMOLOGOUS TO A HUMAN HEMOGLOBIN, FROM PSEUDOMONAS AERUGINO HYPOTHETICAL PROTEIN PA3967 STRUCTURAL GENOMICS, UNKNOWN FUNCTION STRUCTURAL GENOMICS, HEME, HEMOGLOBIN, PSEUDOMONAS AERUGINOS PSI, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUC GENOMICS, MCSG, UNKNOWN FUNCTION
2sfp	prot     1.90	 AC1 [ ARG(2) ASN(1) GLY(1) HIS(1) HOH(3) ILE(1) LYS(1) PPI(1) SER(1) TYR(2) ]	ALANINE RACEMASE WITH BOUND PROPIONATE INHIBITOR PROTEIN (ALANINE RACEMASE) RACEMASE RACEMASE, ISOMERASE, ALANINE, PYRIDOXAL PHOSPHATE
4xh4	prot     1.80	 AC1 [ ARG(1) ASN(2) ASP(1) GLU(1) GLY(3) HIS(2) HOH(2) ILE(1) LEU(1) PPI(1) ]	CRYSTAL STRUCTURE OF SALMONELLA TYPHIMURIUM PROPIONATE KINAS MUTANT, IN COMPLEX WITH AMPPNP AND PROPIONATE PROPIONATE KINASE: UNP RESIDUES 1-402 TRANSFERASE TRANSFERASE, KINASE, TDCD, AMPPNP, PROPIONATE
5fag	prot     1.51	 AC1 [ ARG(1) GLY(1) HOH(1) ILE(1) KCX(1) LYS(1) PPI(1) PRO(1) SER(1) TRP(2) TYR(2) ]	ALANINE RACEMASE FROM STREPTOMYCES COELICOLOR A3(2) WITH BOU PROPIONATE INHIBITOR ALANINE RACEMASE ISOMERASE ISOMERASE, PLP, ALANINE RACEMASE, PROPIONATE

AC3 

Code	Class Resolution	Description
2sfp	prot     1.90	 AC3 [ ARG(2) GLY(1) HIS(1) HOH(3) ILE(1) LYS(1) PPI(1) SER(1) TYR(2) ]	ALANINE RACEMASE WITH BOUND PROPIONATE INHIBITOR PROTEIN (ALANINE RACEMASE) RACEMASE RACEMASE, ISOMERASE, ALANINE, PYRIDOXAL PHOSPHATE
4cvb	prot     1.72	 AC3 [ HIS(1) HOH(3) PPI(1) ]	CRYSTAL STRUCTURE OF QUINONE-DEPENDENT ALCOHOL DEHYDROGENASE FROM PSEUDOGLUCONOBACTER SACCHAROKETOGENENES ALCOHOL DEHYDROGENASE: RESIDUES 37-608 OXIDOREDUCTASE OXIDOREDUCTASE, CARBOHYDRATE OXIDATION, QUINOPROTEIN
4cvc	prot     1.83	 AC3 [ HIS(1) HOH(3) PPI(1) ]	CRYSTAL STRUCTURE OF QUINONE-DEPENDENT ALCOHOL DEHYDROGENASE PSEUDOGLUCONOBACTER SACCHAROKETOGENENES WITH ZINC IN THE AC ALCOHOL DEHYDROGENASE: RESIDUES 37-608 OXIDOREDUCTASE OXIDOREDUCTASE, CARBOHYDRATE OXIDATION, QUINOPROTEIN
4xh5	prot     2.11	 AC3 [ ARG(1) ASN(2) ASP(1) GLU(1) GLY(4) HIS(2) HOH(1) ILE(1) LEU(1) PPI(1) ]	CRYSTAL STRUCTURE OF SALMONELLA TYPHIMURIUM PROPIONATE KINAS MUTANT, IN COMPLEX WITH AMPPNP AND PROPIONATE PROPIONATE KINASE: UNP RESIDUES 4-397 TRANSFERASE TRANSFERASE, KINASE, TDCD MUTANT, AMPPNP, PROPIONATE

AC4 

Code	Class Resolution	Description
4z7e	prot     1.50	 AC4 [ ASP(1) HOH(1) PEG(1) PPI(1) TYR(1) ]	SOLUBLE BINDING DOMAIN OF LMO1422 ABC-TRANSPORTER LMO1422 PROTEIN: UNP RESIDUES 231-504 TRANSPORT PROTEIN ABC-TRANSPORTER, SBD, TRANSPORT PROTEIN
5aoa	prot     1.71	 AC4 [ PPI(1) ]	THE STRUCTURE OF A NOVEL THERMOPHILIC ESTERASE FROM THE PLAN SPECIES, THERMOGUTTA TERRIFONTIS, EST2-PROPIONATE BOUND ESTERASE HYDROLASE HYDROLASE, CARBOXYL ESTERASE

AC5 

Code	Class Resolution	Description
4z7e	prot     1.50	 AC5 [ 1PE(1) GLU(1) HOH(1) PPI(1) ]	SOLUBLE BINDING DOMAIN OF LMO1422 ABC-TRANSPORTER LMO1422 PROTEIN: UNP RESIDUES 231-504 TRANSPORT PROTEIN ABC-TRANSPORTER, SBD, TRANSPORT PROTEIN

AD8 

Code	Class Resolution	Description
5fag	prot     1.51	 AD8 [ ALA(3) ARG(1) ASN(1) ASP(2) GLY(2) HIS(1) HOH(2) ILE(1) KCX(1) MET(1) PPI(1) PRO(1) SER(1) TRP(2) TYR(2) VAL(2) ]	ALANINE RACEMASE FROM STREPTOMYCES COELICOLOR A3(2) WITH BOU PROPIONATE INHIBITOR ALANINE RACEMASE ISOMERASE ISOMERASE, PLP, ALANINE RACEMASE, PROPIONATE

AD9 

Code	Class Resolution	Description
5fag	prot     1.51	 AD9 [ ALA(3) ARG(1) ASN(1) ASP(2) GLY(2) HIS(1) HOH(2) ILE(1) KCX(1) PPI(1) PRO(1) SER(1) TRP(2) TYR(2) VAL(2) ]	ALANINE RACEMASE FROM STREPTOMYCES COELICOLOR A3(2) WITH BOU PROPIONATE INHIBITOR ALANINE RACEMASE ISOMERASE ISOMERASE, PLP, ALANINE RACEMASE, PROPIONATE

AE1 

Code	Class Resolution	Description
5fag	prot     1.51	 AE1 [ ALA(3) ARG(1) ASN(1) ASP(2) GLY(2) HIS(1) ILE(1) KCX(1) PPI(1) PRO(1) SER(1) TRP(2) TYR(2) VAL(2) ]	ALANINE RACEMASE FROM STREPTOMYCES COELICOLOR A3(2) WITH BOU PROPIONATE INHIBITOR ALANINE RACEMASE ISOMERASE ISOMERASE, PLP, ALANINE RACEMASE, PROPIONATE

BC4 

Code	Class Resolution	Description
4uwc	prot     1.96	 BC4 [ ALA(1) EDO(1) GLU(2) GLY(1) ILE(1) LEU(2) PPI(1) SER(1) TYR(1) VAL(1) ]	FIBROBLAST GROWTH FACTOR RECEPTOR 1 KINASE IN COMPLEX WITH J FIBROBLAST GROWTH FACTOR RECEPTOR 1: KINASE DOMAIN, RESIDUES 458-765 TRANSFERASE TRANSFERASE, RECEPTOR TYROSINE KINASE, TRANSFERASE INHIBITOR

BC9 

Code	Class Resolution	Description
5a7r	prot     1.95	 BC9 [ ASN(1) HIS(1) HOH(1) PPI(1) PRO(1) TYR(1) ]	HUMAN POLY(ADP-RIBOSE) GLYCOHYDROLASE IN COMPLEX WITH SYNTHETIC DIMERIC ADP-RIBOSE POLY(ADP-RIBOSE) GLYCOHYDROLASE HYDROLASE HYDROLASE, PARG, ADP-RIBOSE

CC5 

Code	Class Resolution	Description
5a7r	prot     1.95	 CC5 [ GLY(1) HOH(1) PPI(1) ]	HUMAN POLY(ADP-RIBOSE) GLYCOHYDROLASE IN COMPLEX WITH SYNTHETIC DIMERIC ADP-RIBOSE POLY(ADP-RIBOSE) GLYCOHYDROLASE HYDROLASE HYDROLASE, PARG, ADP-RIBOSE

CC7 

Code	Class Resolution	Description
5a7r	prot     1.95	 CC7 [ GLY(1) HOH(2) PPI(1) THR(1) TYR(1) ]	HUMAN POLY(ADP-RIBOSE) GLYCOHYDROLASE IN COMPLEX WITH SYNTHETIC DIMERIC ADP-RIBOSE POLY(ADP-RIBOSE) GLYCOHYDROLASE HYDROLASE HYDROLASE, PARG, ADP-RIBOSE

PP1 

Code	Class Resolution	Description
2sfp	prot     1.90	 PP1 [ PPI(1) ]	ALANINE RACEMASE WITH BOUND PROPIONATE INHIBITOR PROTEIN (ALANINE RACEMASE) RACEMASE RACEMASE, ISOMERASE, ALANINE, PYRIDOXAL PHOSPHATE

PP2 

Code	Class Resolution	Description
2sfp	prot     1.90	 PP2 [ PPI(1) ]	ALANINE RACEMASE WITH BOUND PROPIONATE INHIBITOR PROTEIN (ALANINE RACEMASE) RACEMASE RACEMASE, ISOMERASE, ALANINE, PYRIDOXAL PHOSPHATE
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JenaLib Site Database 03. Jul. 2017








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